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Mutant Lines
13-0300-1

13-0300-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 85212 [Map]; Strand: c
  - AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
    Distance: -518; Region: promoter
Flanking Genome Sequence: 13-0300-1 - 5-prime edge
```
GTGAAGGTGG TCTCGAGGCC TCGAAATTTT AATTTGAACT CAAGGAAAGA 
TGTGTTGACA CGTAATGAAT GATCCAAAAG CT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 85328 [Map]; Strand: c
- AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
  Distance: -634; Region: promoter

ACCTTCACCA CTATTATATA TTAATCACCC CTGTATATTT CCAAGACAAG 
TGATTAACGT TAGCTTTATT ACATAATGTT TTTAGTCACA CTTGAAGAAA 
AGGCAAGTGG GTTTGGATGC AAAAGGCAAG ATTTTAACAT AAGCCCATTT 
GAGGCTTTTG GGCCTTAACC TTTTGGGCCT GTATTACTTA TGAATTACAC 
ATTTAACATT TTGATTATTG GAACCCAACA AAATGGAGCA AAGCCTTATA 
ATAAAATAGA GGGACATGGG TGTCATGTCG ACGTCAAGCG TGAGATGTGA 
GATGTGAGTT TGCACTGCAA ATCCAATAGA ATCTATTAAC GCCCCTTTTA 
AGTTACAGGG CAATCCAGTT AGTACAAAAT AAAGAGTTCC TAATAAATGT 
CGCAAAGGTT AACATGGTTA TATTAAAGAA GATGGTCGGT ATTTGCCTCC 
GGTCAAATAC TTAGTGAAGA ACTCACGGGC AAGAGCGTTA AGATCACCGT 
CCTCATCCAC TGGATTTTCC AGGCCAAAGA ATGTGCTAAG ATCCACTGAC 
TCTGTTGGGA CCTCAATANC TTCTTTTGGC TGTTCTTGTT CTTGTTGTTG 
GGACATACAA GGAATGTGTG ACGACGAGGA AANACATATT TGTCTTTTGC 
TATCGACAGA ANAAATGAGT GGCACATTTA AATGAAAANG CTGGCTTCTT 
GTCCGNGAAT TTGTTTTTGA NAATTACCAN C

AT4G00200.1

Model type: Protein coding
Short Description: AT hook motif DNA-binding family protein
Computational Description: AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR