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Mutant Lines
13-0076-1

13-0076-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 22773107 [Map]; Strand: w
- AT3G61530.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G61530.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
  Distance: 0; Region: exon2 (CDS)
- AT3G61540.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -279; Region: promoter

CCATGGACAA CCATGGCAGC TGAATCTCCG ACGAGACAAA CATCGATTCC 
AGCTGTATCG ATGTGAACGG CAGAAGGGTA ATCGTAGGCG GTGACCATAG 
TTATCGGCTC ACCTTTCCGA TGCNTTCTGT CTCAATTGCN GTCAAAGTCA 
CTCTCTGATT CGAGTTCTGC GGTTTCGGTC CTCCGTAAAC CGTGTCCTCC 
GGTACGTTGC TCATAAACCG GACGGTGGTG ATGGCTCTCG AAGCACGAGA 
GCAACAACTC CTGACGAGCG AAGCAGCCAT TGTTGTTGCT GATGAAAGCG 
ATTTTGGAAT TAGTTATAAA TTTAAAGACT TTTGGATAAA TATTTTTCTT 
TTAAGAATAA AAACGATGTT GGCGACTCAC GCGCTGGTGA CTCCGATTCC 
AAAGTTGACT GCTTTCGTAC TCTCTCTATC TACTACTCCA TCAAGATTGT 
CTGGTTCTGT TCCGGGTTTG ATTGATTTCT ACCGTCGCCG GAGATTTTGT 
CGTGTAATCA CCTCCATGGC TGAAGCGGGA TCGGTTTACG TCGATGTAGC 
TGGGGAATCG AAGTCGGAGC ATGTTACTGG GAAGTGGTTT TCGGTGCCGG 
AGCTCCGACT GCGTGACCNC CGGTTCATAG TTCCTCTTGA TTATTCCAAA 
AGTTNTCCCA AAATTCCGNC TTTNCTNAGA AANCCGTTGC GGGTA

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22772991 [Map]; Strand: w
  - AT3G61530.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (CDS)
  - AT3G61530.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT3G61540.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -395; Region: promoter
Flanking Genome Sequence: 13-0076-1 - 3-prime edge
```
GTCCATGGCT ATGACACCAC TCTTCCTATC TCCTTAGAGG AGATGCTTGT 
TCACTGTCGC GCCGTTGCTC GCGGAGCCAA AAGACCACTT CTTGTCGGCG 
ATTTGCCGTT TGGTACTTAT GAATCTAGCA CCAATCAGGT GAATAATCTC 
GAAAGTTGGA TACTTTGTTT CAAATTCACA ACCCAAAGGA TC
```

AT3G61530.1

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Curator Summary: Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Computational Description: PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 7570 Blast hits to 7570 proteins in 2036 species: Archae - 128; Bacteria - 4151; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3088 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61530.2

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Curator Summary: Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Computational Description: PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61540.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: peptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1602 Blast hits to 1599 proteins in 535 species: Archae - 0; Bacteria - 1162; Metazoa - 5; Fungi - 126; Plants - 75; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link: InterPro Scan - TAIR