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Mutant Lines
12-5583-1

12-5583-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 172598 [Map]; Strand: w
  - AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-5583-1 - 5-prime edge
```
TTATCAACCG TGTCTTGAAA GCACATCCTC CGATGCAGAA AGCT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 172482 [Map]; Strand: w
- AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

GTTGATAATG TGAGAATCCC ATCTGACGCC GAGATGTGGA AGCTGTTCTT 
GAGCAGAGTC CCAAGTGGAG TACTTGAGGA TGTTATAGAT GTTGGATACA 
ATGTCTCTTG TGTAAACACT GGGATCTGGT AGGGTCTGTG TTTTCACAAG 
TTTGGGTTTT TGGGAGAATC GCTTGGAGTT GGTGGGTTTT AGACGAGGAA 
GAGAGTGAAG TAGCTTGACG GAGCTCCGGC GATTGGAGAA TTGGATTGGG 
GTATTGCGGA AGATGCTAGA GAAGCGCATG AAGCT

AT2G01390.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR