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12-5029-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3752504 [Map]; Strand: w
      • AT3G11880.1 - [+] show detail - Protein of unknown function DUF2359, transmembrane
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-5029-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTGTGTGCT TATTTTTGTG TGCTTTTGTC ATCTGTATTC 
    TCAAAGTTAA TTCAACTGTA AAATGTGGTC AGGCCTCCCA AGGTGATTTA 
    TCTGTAGGCT TGTATTCATG GTCGTGTAAC TTGTTACCAG TATTTTACCA 
    AGAAAACTTG TTACCAGTAT CCCGTAGCAA CTCTCAGTCA ATGGATCTCA 
    TCCTGCAGTT GGCTGAGATG TGAGTCGAAA ATTTTCTTGT CATTTCCTTT 
    GCTATATATA TACAATCATC TGATCATTTT CTTGGCAGGA TTTTGTCTAA 
    TCTTGATGCT CGGACTATAC TTGTAAACGG AACCGTTATA GATAAACAGC 
    GACTGATTTC ACCTTATGCA TTTGAGCTCT TGATGCGGCT TACATTCCCT 
    GCTTCATCTG AAAGAGTAAA GGTAAGCACT AGTGTCAGAC TTTATGATGC 
    GTTTGTCAAT TCTGATCACA AGCATGGTCT CTATACGCAC ACAGGCTACA 
    GAGAGGTTTG AGGCAATTTA TCCCTTGTTG AAGGAAGTGG CTCTTGCCTG 
    TGAACCANGA AGCGAGTTAA TGAAACAAGT CACTCAACAA ATATTCCATT 
    ATTCTTTGAT AATAGCCTGG AANAAGTAAT AGNAAATGGA ATCTTTAATC 
    CCTGAGTTTN TAGTTCCCNT CTNTNNTTCT CCAAANANAA NTCTTATGNT 
    TANCCCTTTN NNACAAGAAA AN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3752437 [Map]; Strand: w
      • AT3G11880.1 - [+] show detail - Protein of unknown function DUF2359, transmembrane
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-5029-1 - 3-prime edge 
    TGGGGAACAA AAGATCACAT GAACCTGAGC CATCATCCAA ACTAAAATCG 
    GAAGCT

AT3G11880.1

Model type
Protein coding
Short Description
Protein of unknown function DUF2359, transmembrane
Computational Description
Protein of unknown function DUF2359, transmembrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G70770.2); Has 155 Blast hits to 134 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR