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12-4928-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26260049 [Map]; Strand: w
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-4928-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ACATTGTACA GTAACTCTGT TTATGTTTAA 
    AATTTTGTCT TTAATTACGC AGATAATGGG ATTAAAAAAC AGAGAACAAA 
    CAGAATCAAT AAATCTAAAC AAAGAAACTG AAGGATCTTG CAGTAACAGA 
    AGTGATAACA GTTCCGATAA TCTCAGACTA GATATCTCAA CTGCGCCGCC 
    ATCAAACGAC AGTACATTAA CCGGTGGCCA CCCACCGCCA CCACAGACAG 
    TTGGTCGACA CTTCTTCCCA CCGTCGCCAG CCACCGCAAC GACAACTACT 
    ACAACAATGC AGTTCTTTCA AAACTCATCT TCAGGACAGA GTATGGTTAA 
    AGAAGAGAAT AGTATCAGTA ACATGTTCTG TGCAATGGAT G

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26260048 [Map]; Strand: w
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-4928-1 - 3-prime edge 
    NTTGAAAACG GNAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTA 
    TGTGATAAGC ATAAAGAAAC TATTGTTTTC AGATCTCTTT CCAGACAAGA 
    GTGAAGAAAA AAAGAGATAA TGATGTCTGA AAAGTCATGA ATCATGTCCA 
    GTTTTTTAAC CCTACCTGAA AGCAACTCCT GATCCAAATA ATTATAAACC 
    AGAAATATAA TCTTTAACCT TTTTTAAAAA GAAAAAAATC ATCCTTTAGA 
    TGGAAAATAA CTGTAATTAT TGATCATTAA CCAAAAAAAA AATANCCCAT 
    NGATTTTTTT NGTNAATTNA TNAAATNAAT TNCCTCANCT GGGAGTTTCT 
    GATTNTNAGT TNNAAAAAAA TCNTTTNCAN CTTTAAGNGT NTNAAACNGT 
    NTTTNAANAG TNTNANAATC TTTNTNTANC NGCTTNGTTT NCCANCNANC 
    TNTTCNATTT TNAANCCAAA TCGCNATCTG TNTNGGTNGC AANCCTANGG 
    CCCNANCTAN CNGCNTTTNC CTNTNNGGTT NANGTTNGTT NCCAANCNNA 
    AAGTNNTTCT NTAGGGTCTN NACTNGTNCC ANGTTNAATC TCCTTTTTTT 
    NTNTCCCATT NGGGACCCAT CNTCNGAATA ANCCTNTTNN CCATTCATNT 
    TGTNCCCTGT TTNTAAATCA CAACNCCCTN CCNTGGGANA TCTCTTCCCT 
    ANAACCGAAG CAAATCCTGA ACCANAACAN ACCNGANCTT TNNAANGAGA 
    TNGNGAGAAA CCNGAGGAAA TGTGN

AT1G69780.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper protein family
Curator Summary
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description
ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR