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Mutant Lines
12-4711-1

12-4711-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 681060 [Map]; Strand: w
  - AT3G03010.1 - [+] show detail - Peptidyl-tRNA hydrolase II (PTH2) family protein
    Distance: -455; Region: promoter
  - AT3G03010.2 - [+] show detail - Peptidyl-tRNA hydrolase II (PTH2) family protein
    Distance: -458; Region: promoter
  - AT3G03020.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (5UTR)
  - AT3G03020.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (5UTR)
  - AT3G03030.1 - [+] show detail - F-box/RNI-like superfamily protein
    Distance: -994; Region: promoter
Flanking Genome Sequence: 12-4711-1 - 5-prime edge
```
GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCC GGATCTGAGA CCCTGAAGAT GATCTGGAGT 
TATCTTGGTC CGAGCAGTTC ATATGTCCTT AACATCTTCG GGGAATGTCA 
AAACCATTTT ATAAACACAA AATCTTCTTC TTCTTCTTCC TTTCTCTCTC 
TCCATAATTC TTGTTTGCGT CATTCATTCA TCACATATCC ACATACCACA 
GAGACAGAGG AATCGTCCTT TATCAGAAAT GGCAGGCAGT AATCTTCTCC 
AAGGTATACT CTATTTATTC TTCTTCTTTG ATGGTACTAC TATTTGATCT 
GATCTATTTT GAGTTCATTT TTCTCTAGTT TGGACCTGGA ATCAGTTTCT 
CTCTTGTTAG CTATTTCTCT CTTCTCTATT GTATGAAATC AAATCCAAAT 
CTATTTTGCT CTTGAAGACA ACCTAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 681015 [Map]; Strand: w
- AT3G03010.1 - [+] show detail - Peptidyl-tRNA hydrolase II (PTH2) family protein
  Distance: -410; Region: promoter
- AT3G03010.2 - [+] show detail - Peptidyl-tRNA hydrolase II (PTH2) family protein
  Distance: -413; Region: promoter
- AT3G03020.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 0; Region: exon1 (5UTR)
- AT3G03020.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 0; Region: exon1 (5UTR)

GTCAGATCCA TCTTCTCGCT AAGCAAATCA ACAGTTCCAC CGGTACTAGA 
GCGATTGATT CAAACCTAGC ACTTATGACT TAAGAACAAC AACGCGAGTA 
GGAAACTGAT TTTGAGACTG TGACACAGAG GTTTTAATTG AGAAGAAAAA 
TAATCTACGA GGAGGTCAAT GCCGTACGAC AAGTGAGAAG ACGCGTTAAC 
TTTAAAGGAA TATTTGGACT CTTTCTTTTT TTTTTTNTNN CCNNGGCNTN 
AAAAACCCNC NAGTNTNGGN TTNGTGGGTT NNANCTTTTT TTNTNCAAAA 
NCANTTTCNT TNGNTTTTTN AAAAAAANCA NTNTTAGGGA ANGTAANTTT 
NNTTTCAAAA NNNCCAAAAN GNANTTTTTT TTAAAAANNA AANGGGGCCG 
TNNAANNTTT AAANGGCCCA ANTTTNNCCN NTTTAAAAAA AATGGGNANN 
ANCCNTTTTA ANCTTTTTAG GGNNAANCCT TTTNNNGGGG CCAANCCCCA 
AANTTTCCCC AAANTCNTNN AANNTNNANN AAAAAAANAA ANTTNTNANA 
GTTAACCCNC NGGAAAATTT TAGGGGANNA ANTTTTCCTT TACCCGCCCN 
TNGNAANTTT NTTTCNCCAN TGGANAGGGC TTTTNANTTG GGGGNCTACN 
NAAATNCCCT TTGGGGGAAA CCCCAAAANC NNNAAGNNNN TTTTTTTTCN 
NTNNAANANC CCNAANACNG TTTTTTT

AT3G03010.1

Model type: Protein coding
Short Description: Peptidyl-tRNA hydrolase II (PTH2) family protein
Computational Description: Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT5G16870.1); Has 884 Blast hits to 884 proteins in 331 species: Archae - 257; Bacteria - 13; Metazoa - 196; Fungi - 135; Plants - 86; Viruses - 8; Other Eukaryotes - 189 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03010.2

Model type: Protein coding
Short Description: Peptidyl-tRNA hydrolase II (PTH2) family protein
Computational Description: Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT5G16870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03020.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03020.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03030.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G03040.1); Has 1867 Blast hits to 1823 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1867; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR