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12-4306-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59426 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -140; Region: promoter
    Flanking Genome Sequence: 12-4306-1 - 5-prime edge 
    ATCTTAACTA TGTCTTCTAT TACAACCCCA CTCTTACATC ACGCGCGTGG 
    CTTGCAAACT CCTTTCAGTG ACATGAACAT GATGGTAAAC AAAAATACTA 
    AATGTTATGA TATATTTTTA AATATTGTAT TTGTCTTCTT GAATTACTAG 
    AAACTATTAA AAAAAAAAAA NNTTTNCCCN ANNTTTTGGN GGNGGNCCCG 
    GNNNNTTAAA AGGNNANAAA NCTGGCCCAA AAAAAAAANG GGGGGNNNAA 
    ANNNTGGGGN NGGGGNNGGG NTTTTTNAAA ANNNTTTTNN NNNAAAAAAA 
    TTNGGGGGGG GGAAANNNNN TTGGGGNANN NGGNTNGGTN NGNTTNANNC 
    AAANGGGGGG GGGGGNTTTT CNNTTNGGGG GGAGTTNGGC CCCNAAANTT 
    TNNTTTGGGG GNGGGNAAAA CNNNNGGGNN NNTTTTNNNN A

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59310 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -24; Region: promoter
    Flanking Genome Sequence: 12-4306-1 - 3-prime edge 
    GTTAAGATTA GAAAGCAAAG ATTAACAAAA TGTTGTGTAA GAGAAGCTGA 
    TGAATTGTTT AATCAGCTAA GTTAATGACA AAGGCAAAAT GATAGGAAAC 
    GGAAATAAGA GAGAAAAAGC GAGGNGGAAG GNCNGNTGNC CANTNCATTT 
    TCTNNCTCNC ATNCATTATT CCTTACCACT CCTCTTTCTT ACACCCACNA 
    AGAAGAAGAA GANGANGAGC TTCAAGANNA CAANTTCACT ATTGGTTATC 
    GNCTGCAATG CCNTTCCCCT TTNAAGAGTT TCAAGGGAAG GGGATTTCTT 
    GTTTCTCTTC TTTCTCGTCT TCCTTCCCCC AACCACCGTC GTCTCCGCTT 
    TTGAGCCACC GCAAAGCAAG AGGCGGCGAA GAAGAAGAGG AAGAAGTTCC 
    CGCGGCGGAG CCTACCTCTG TTCTGGACTC CCTCATAAGC CCAACCTCTT 
    CCTCCACGGT GTCTTCCTCT CACGGCGGAA ACAGCGCCGT CGGAGGCGGC 
    GGCGACGCCA CCACCGATGA GCAATGCGGA GCCATTGGGT TGGGTGATTG 
    GGAGGAGCAN GTTCCTCATG ACCACNAACA GAGCNTTCTC GGACTCNTCN 
    TGGGAGATTC CACANATCCC TNTCTTGAAC TCANCNGCTT CTNCNNNCNT 
    NTNCNNNNTN NNNNNTNTNC CTNCTNTCNN CNNNNNNNNG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR