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12-3160-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54092 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -643; Region: promoter
    Flanking Genome Sequence: 12-3160-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGAATATCCC ACAAGAAACA AAGCAAACTA TAAAAAAAAT AATGCGGTAA 
    ACACGGAAAA TATCACATAT ACGAATCCTT TTTCGGATGT GTTTTCAATC 
    CTTTGAATTA AATATGTCCA CACTTCGATA TGTAAAAACA ACTTGACCCA 
    TCACAATTAT GATCATAAAA TACCAACGTA CNTGTTAGCC TAATGATAAA 
    TCTCCCAAGC AGAGGTGTTT AGATCGAGTT ATGTTGTAAG GGATTTTTTC 
    TCCAAAGGAG ATAAATTTAA TTTGATGTGA ATT

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR