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12-3151-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 280794 [Map]; Strand: w
      • AT2G01630.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon2 (CDS)
      • AT2G01630.2 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-3151-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCT 
    CGACACCGCA CTCTTCAACC ATCATTCTTG ATTCTTTCCC TCCTTCGCAA 
    GCT

AT2G01630.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2926 Blast hits to 2856 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 93; Plants - 2819; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01630.2

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR