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12-2093-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103095 [Map]; Strand: w
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-2093-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAA GAGGTTTAGT CTCTATTAAG TGAGTTCTGT AGTAATCGGG 
    ATATCCACCA ACTTTTGATA ATCAGGTCGA ACTTCTCCTG AGAGTTCATC 
    ACAAGAACCT AACCGCTCTT ATCGGATACT GCCACNGAAG GCAAGAAGAT 
    GGCCGCNTTA TCTATGAGTT TATGGCTAAT GGAACCTTAG GAGATTACTT 
    GTCAGGTCAG TCTATTTGCT ACTTTGTTTT GGTCACTGGT CTTTTGCTGC 
    TGTAGACATT GTTTTACAAA ATGAAGGTAC CATTTGACCG CAAGAATTAA 
    GCGAGAAAAG TGATGTTTAG AGCTTCGGGG TTGTTCTTTT AGAGGTTGTC 
    ACAGGCCAAC CGGTGATTGC ACGTTCAAGA ACAACAGCAG AGAACATACA 
    CATAACTGAG TCGACTTTAA TGCTGTCGAC AGGAGATATC ANAGGCATTG 
    TGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103079 [Map]; Strand: w
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-2093-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGTGTATAAG AGAGTTACCT CTGCTCTGAA CTCTTCGTAC CCTTGAGCCG 
    ATGATTCAGA AAGAATCTTG ACAGCTACTT GGTCATCATT TAAGACACCA 
    TGATATACTT TTCCAAAACC TCCTTGTCCA AGAACTCTCT CAAAGTTGTT 
    TGTAACTTTC ACAACTTCTG AGTATTTGTA GTATCTCTTA GTTGTGTCCA 
    TTGGCCCAGT CCTGACGCCA TCACCAGAAC CACCTGTAAA GATCTCATAA 
    GAATATTTCT TCCAAGTAAA CTTAGAAATC AAAGAAGAAG CAATGTAGGA 
    TCGTTTCTTG ATGTTTTTAC CATTTCGATG TCTCTTCTTG TACTGCAAGA 
    ACAAAGCTAT TGCTACTACA AGACCAAGCA CTCCCGTGAC AGATGCTGCT 
    AATAGAATGA TGTACACACT CTTTTTTGTC TTCTCATCCG GAATTTGACA 
    TGAAGCAGAC ACGCAGACAT AGCACCCGAT AACTTGTTTC CTTCCAAGTT 
    TCTGCAGACA TATATGTGAT ATGAATATAA ATTCCTCAAG TTATAGTGAA 
    GTCAGTGTCT ATGTAATCTA CATTTCCTGT TGAAATGTTG TTTGATAAGC 
    CCCTGTAATG AAATTTTGGT TGCATCAGTT TCACAAATCT GTATACAAAA 
    GAATT

AT4G00236.1

Model type
Pseudogene
Computational Description
pseudogene, similar to leaf senescence-associated receptor-like protein kinase, blastp match of 56% identity and 4.7e-52 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris}
Link
InterPro Scan - TAIR