1. Home
  2. Mutant Lines
  3. 12-2008-1

12-2008-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22307627 [Map]; Strand: w
      • AT3G60350.1 - [+] show detail - ARABIDILLO-2
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 12-2008-1 - 3-prime edge
    GTACTGAAGG TGACGACACT ATGTTCACCA CTGATAATGA GAAGGTTAGC 
    CTCTTCAATT TCAGAAAGAA TGCTGACCCA CAGATGGTTA GAGAGGGGGG
    AGTTGTAGCA CTTGTTCAGC TCTGTTCGTC TTCTGTTTCC AAAATGGCTC
    GTTTTATGGC TGCATTAGCA TTGGCATACA TGTTTGATGG AAGGTACGTA
    AAACTTAATT ACTGTAATCA TATCCACATT TAAGGTAATT TGCAGATC

AT3G60350.1

Model type
Protein coding
Short Description
ARABIDILLO-2
Curator Summary
ARABIDILLO-2 and its homolog, ARABIDILLO -1, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-2 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-2-overexpressing lines produce more lateral roots than wild-type seedlings.
Computational Description
ARABIDILLO-2 (ARABIDILLO-2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-1 (TAIR:AT2G44900.1); Has 10264 Blast hits to 5575 proteins in 291 species: Archae - 0; Bacteria - 64; Metazoa - 4302; Fungi - 778; Plants - 4057; Viruses - 0; Other Eukaryotes - 1063 (source: NCBI BLink).
Link
InterPro Scan - TAIR