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12-1910-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 297321 [Map]; Strand: c
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-1910-1 - 5-prime edge 
    ATCAAGAGAA TGTCTTGAAG AAGCTGGAGT TGTTGGCAAC GTTGAGGTAT 
    TTTAAAGTTA AAATCTTTTT GTTGTTATGT TTTGTTTGAT ATTTGTTGTA 
    TTGTTTTGTT CTTAATTTTG TTTGGTTTTG ATTATTTCAG CACCAACTTG 
    GAAAATGGGA TTTTTTAAGC AAAAGCAGAG GAACATACTA TGAAGGACTA 
    ATGTTCCCTA TGCTTGTTAC ANAACAACTT GAGCTTTGGC CTGAACAACA 
    TGTTAGGCAA AGAATCTGGG TCAGTAGCTA AATAAAACTA TGTTTTCTTT 
    ANATATTTTG TAACATATCT AGTGTTTTAC TGATTGATAT GAATTTATNG 
    GGGACAACAN ATGAATGTTN CCCNANGCAA AGAAAANNTA TTTNNCCNGG 
    CNGANAANAC NCNCNCCCCC CNG

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR