Home
Mutant Lines
12-1683-1

12-1683-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 57965 [Map]; Strand: c
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 0; Region: exon1 (CDS)

AAGNCGACAG CTTNTTTCTC CGACGANNNA NGCCACCGAG ATGGANCCGA 
GGNGGTCTAA NCTNATAACT TGGATGTNAA NGGAGATGTT GATCTCAAAG 
GCNAATGNGC TTNGANGCTG CCTTGAGTGA ANCCAANTTC NGAGCTGGNC 
GTGGTTCNCC NGANAAGCGA AAACTNGTGA TCTTGANGGA GAGAGGATCG 
GCTGTTGTCA CCGGNNAACA TNCTCTTGCA TGAGGGAAGN CNATTGGNCA 
CCGNAGCCGA TATGGNAGTC GATNATGTTG GAGACGGTGG AANCCATGGA 
ANGACTCTAA NAGGGCTTGN TTGGAGGTNN AGNTGGCGAA CCTGAANAAC 
NGGAGATATC NCCNACNCNG GCCGGNGACC ANGCNNGCNN CTNTCTTTGC 
GNTCCNANTT NCCTCCNCNT NNTTTCCCTT TCNAACACNN AGACATNTCT 
TNCATTTTNT NTNGGGNTNN NGCGTTTNTN TNCGACTTTN TTNATTANAT 
NNCCNNNACT TNCNCNCNNN NCCTNCTCTT GCCNTTCTNN NCCNCNNNNT 
NNNTTTNNTT NTTTNCNNCC NNGNANCGNN NNNTNNGTNN ATCNNTNAGG 
NGATANAATN CNNTNTTNNT NATATAANAT TNATNTNCCG ANANACTCAA 
NNCATAATAN ANTNGTTNTN TNCACCNATA TTNNTNNCNN NNGTGNNNAN 
NNNATTATCN NNGGTCTATN ATATGNANCG NNGNNNTNTN NTANNAACNA 
TNCTNTCNNC TNCC

5 prime edge [+] show sequence

Chromosome: 3; Position: 19264825 [Map]; Strand: c
- AT3G51910.1 - [+] show detail - heat shock transcription factor A7A
  Distance: -469; Region: promoter

CCACCTTTTG TGTTTTACAA ATATAAAAAC AAAGAGTGAT GCAAATGGCA 
ATTTGTAATT GGGTTAAGTT TGGTTTTAAT GTTGGATGTG GCTGTTGTCT 
CATCTTGACA TTTGGCTTGG GTCTAAACCG GATTGGTTAA GGCTAAAATA 
AAACCAACCA GAAGTACTCC AAGAGTTGAT TGACAAATTC CCTGCAATTA 
GAAGGCCTCC ATTAATTTCT GACTAGTAAA TTTCTTAGGT ATTTTTCTTT 
ATAATATATA AGTTAGAGAT ATTTATAAAA TATGCACTTT TATATTAATA 
TATGGCTACA AAACATTTCT TCTTTTTAAA GCAAAAACTT AAACCCTTAA 
CCCAAAAGAG AAAAAATGGG TACATGCCTT AAAATGGACT ACTCAGGTAA 
TTCAGAATTG GTCGGTCAGA ACAGTATCTG GAGCACAACT TCGTTGTTGT 
ATTTTTTCTT TACATTCGTA GAACATAGTT TCTAATCAAC AAAAAAATAC 
ACGAAAAAAG ATAATAGTAA TTCACTAGCA AACAATTTGT ATATATTTTT 
TGTCGTTTGA CCTTCAAGAA TGGGTACATG TATTTAAATC AGNTTATTCT 
GAATTGGCCG GTTAAAACAG TATCTGGAGC AGAACTTCGT TGGTTGTTTT 
TTTTTTACAT TCGGAAAACA NAATTTTTTT TAANCAANNA AAAAAAA

AT3G51910.1

Model type: Protein coding
Short Description: heat shock transcription factor A7A
Curator Summary: member of Heat Stress Transcription Factor (Hsf) family
Computational Description: heat shock transcription factor A7A (HSFA7A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of cellular protein metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G63350.1); Has 2181 Blast hits to 2167 proteins in 235 species: Archae - 0; Bacteria - 14; Metazoa - 383; Fungi - 487; Plants - 788; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR