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12-1546-1

12-1546-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7439482 [Map]; Strand: c
- AT1G21250.1 - [+] show detail - cell wall-associated kinase
  Distance: 0; Region: exon1 (5UTR)

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTCT CTCTCTCTCT CTCTCTCTAA CTCTGTCCCT 
CTTNNGAGTT TTTTTCGCTA ATCTCCNTGT TCTTATAANA AACAACTGTA 
TACGAGATGT TCTCTCTCAC TCATTTTCGC NNGCCCCTNC CNATTTTCCC 
AGAAANTGCA ANAAGACTAA AATTCANCTA CACANCCAAC GTANCCAGNG 
AAGAGGACGT NTAAGCACGC TGGTGCTTAT TCCTGTATAG TATCCTAACA 
NNCACGTNTG CTTNGGNTAA ACAGAGACAA CTATAGTNTA TNGGTCTNGG 
TCTTCTCGTC TTTTCTNGAT ATCNTGNNCG NNAGAGANGA CAACTACNGG 
TCTNGGTCTT CTCGTCTTTT CTNGATATCN TGCNCGCTAG AGANGAAACC 
AATNNGCTTN TGTTAATNAA TAANAGAGAG NGACACTNAC TTGCTNACTA 
TNCAAAGATA AANACAGNNG ATAGNGGGAN NGAATCTTCA ANTGTCNGGG 
CCCTNTGTTN TTTTNTGGAT ATCACANGGC AAATTNACTC TTTTTCTTAA 
CAGATCTTNC CACCTNAAAT TAAGCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 7439473 [Map]; Strand: c
- AT1G21250.1 - [+] show detail - cell wall-associated kinase
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATCAGAGAGA GAGAGAAATA AAGAGAGAAG AGAGGTAGAA GATGAAGGTG 
CAGGAGGGTT TGTTCTTGGT GGCTATTTTC TTCTCCCTTG CGTGTACGCA 
GCTGGTGAAG GGGCAACATC AACCTGGTGA GAATTGCCAA AATAAATGTG 
GCAACATCAC AATAGAGTAC CCTTTTGGCA TTTCTTCAGG TTGTTACTAT 
CCCGGAAATG AAAGTTTCAG TATCACCTGT AAGGAAGATA GGCCACATGT 
CTTAAGCGAC ATTGAAGTGG CAAACTTTAA TCACAGCGGC CAGCTACAAG 
TTCTGCTTAA TCGATCCTCT ACTTGCTACG ACGAGCAAGG AAAAAAAACT 
GAGGAGGACA GTTCTTTTAC ACTGGAAAAT TTATCTCTTT CCGCCAACAA 
CAAGTTAACT GCAGTAGGCT GTAACGCTTT ATCACTTCTG GACACTTTTG 
GAATGCAAAA CTACTCAACT GCATGCTTGT CATTATGCGA TTCTCCCCCA 
GAGGCTGATG GAGAATGTAA TGGTAGAGGT TGCTGCANAG TCGACGTTTC 
TGCCCCGTTG GATAGCTATA CATTCGAAAC TACATCAGGT CGCATCAAGC 
ACATGACTTC TTTTCACNAC TTTAGTCCTT GCACCTACGC TTTTCTCGTT 
GAAGATGATA AGTTCAACTT CAGTTCTACA NAAAATCTTC TGAATCTGCN 
AAATGTCATG AGGTTCCCTG TGTTACTANA T

AT1G21250.1

Model type: Protein coding
Short Description: cell wall-associated kinase
Curator Summary: cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides.
Computational Description: cell wall-associated kinase (WAK1); FUNCTIONS IN: kinase activity; INVOLVED IN: cell surface receptor linked signaling pathway, response to virus, defense response to fungus, response to salicylic acid stimulus; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 130372 Blast hits to 120319 proteins in 4569 species: Archae - 123; Bacteria - 13482; Metazoa - 56283; Fungi - 9380; Plants - 33196; Viruses - 438; Other Eukaryotes - 17470 (source: NCBI BLink).
Link: InterPro Scan - TAIR