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12-1244-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60267 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -981; Region: promoter
    Flanking Genome Sequence: 12-1244-1 - 5-prime edge 
    CGAGTGGTAG TCCTTTATTG AGCAGACAAT GGAAGTCACC AATCACCATA 
    TATATACATA TATAAATATA TCTACCAATG GAAAACCCTA TAATAAATAA 
    ATGAATAAAG CAATCAGAAA AAACAACAAG AAAGAGAGGT GGGTAATTGA 
    TGAAGACAAA TTAAAATCGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60151 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -865; Region: promoter
    Flanking Genome Sequence: 12-1244-1 - 3-prime edge 
    ACCACTCGTT CTTTCTCAAT CTCTCGTGCA TTTAACTTGT CACAGAAGAA 
    ACATCATTCA CAGATCTTCA ATCACTTTTT TCCTTCAAAC GAAAAGATGT 
    ACCAAAGAAA GTATGTTTTT ATATACACGT AAATATATAT AGAACTCCTT 
    CTTTGTTATA AGTAGTACAT GAATGTTTCA GATAATGACG ATCATTCGTA 
    TCTCGTTAAG TTAAAACAAC AAAAACAAAA CAGATATTTT TGATGTAACT 
    CCAATATATA CATAGTTTTT TTTTCCACTT NGTTTANATT TATAAATTTA 
    NATTATGTCC GTAGCAAAAA AAAAAAAAAA AAGGGGGGNC CCCCTTTTTT 
    TTNNCCCCCG NCNNTNGGGG GNTNCCCCCC NNNANGGGGG GGGGGGNTTG 
    GGGGGGNNNT TTNNAAAAAA ANAANNAAAA ANTTNCCNNN GGGGGGGGGG 
    ANNNCCCNNG GCCNNTTTTN G

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR