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Mutant Lines
12-1174-1

12-1174-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 29002086 [Map]; Strand: w
- AT1G77180.1 - [+] show detail - chromatin protein family
  Distance: 0; Region: exon1 (5UTR)
- AT1G77180.2 - [+] show detail - chromatin protein family
  Distance: 0; Region: exon1 (5UTR)
- AT1G77180.3 - [+] show detail - chromatin protein family
  Distance: 0; Region: exon1 (5UTR)

TGTGCGAGGC GGCGCAGACC GATGAAGAAC AACGAACGGA AGTGAAGCCT 
TTTTCTGGGG AAAAAAGAAA TCGGGCGTGA AGCCTTTTCT AGGGTTGATA 
GGATTAACAA CAAAAAAAAG GAATCAATTG TCTTATACGC AGTGTCTATG 
TAAGTCGGTT TAAAAATAGA CGAAAAAACG AAAAGGATAA CGTCGCCTGA 
GAGATTCGAA CTCTCGCGGG CAGAGCCCAT GTACTTAGCA GGCACACGCC 
TTAACCACTC GGCCAAAGCG ACTTATTGTT TTTAAATCGA AGAAAGTTAT 
ATATATAACT ATAGGTGTTG GCTTTTTGAT ATATACAACA ATTCTGAGCA 
TCTCATAATT ATTTGCATTG TCCTTAATGA AAATCCGTCT CAAACACATT 
CCCATAGTTT CGTTTAAAAT ACTGAATT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 29001970 [Map]; Strand: w
  - AT1G77180.1 - [+] show detail - chromatin protein family
    Distance: 0; Region: exon1 (5UTR)
  - AT1G77180.2 - [+] show detail - chromatin protein family
    Distance: 0; Region: exon1 (5UTR)
  - AT1G77180.3 - [+] show detail - chromatin protein family
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 12-1174-1 - 3-prime edge
```
CTCGCACATC GTTTCACCTT TCTCAGAATC TCTCTTCCCG TCGATTAGTT 
TCCTCAGAGG TTAGCTTCTT CGATTTCTCA GATTCAATTC TGCTTTTTGC 
TTTCCTCCTG TTGTTTTTAG GTTTTTGTCG ATCTCTATGT TCAGCGATTC 
CTAAACCCTA CTTGTTTTCC GCTCTATTGT AGTGAATCCA ACCCAGATTT 
TTCAGATTTT AATCGGAATT ATTCGGGATC TAATGCTCGC GTCGAGTTTA 
TCGCTAGAAA ACCCTAATTT CGGAGGATCT GTCACTTTTA TTATCAGAAG 
CT
```

AT1G77180.1

Model type: Protein coding
Short Description: chromatin protein family
Curator Summary: Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.
Computational Description: SKIP; FUNCTIONS IN: transcription activator activity; INVOLVED IN: response to salt stress, response to mannitol stimulus, RNA splicing, response to abscisic acid stimulus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015); Has 9534 Blast hits to 6488 proteins in 453 species: Archae - 14; Bacteria - 426; Metazoa - 4688; Fungi - 1154; Plants - 570; Viruses - 47; Other Eukaryotes - 2635 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G77180.2

Model type: Protein coding
Short Description: chromatin protein family
Curator Summary: Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.
Computational Description: SKIP; FUNCTIONS IN: transcription activator activity; INVOLVED IN: response to salt stress, response to mannitol stimulus, RNA splicing, response to abscisic acid stimulus; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G77180.3

Model type: Protein coding
Short Description: chromatin protein family
Curator Summary: Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress.
Computational Description: SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015).
Link: InterPro Scan - TAIR