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12-0958-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172512 [Map]; Strand: w
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0958-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATCTGACGCC GAGATGTGGA AGCTGTTCTT GAGCAGAGTC CCAAGTGGAG 
    TACTTGAGGA TGTTATAGAT GTTGGATACA ATGTCTCTTG TGTAAACACT 
    GGGATCTGGT AGGGTCTGTG TTTTCACAAG TTTGGGTTTT TGGGAGAATC 
    GCTTGGAGTT GGTGGGTTTT AGACGAGGAA GAGAGTGAAG TAGCTTGACG 
    GAGCTCCGGC GATTGGAGAA TTGGATTGGG GTATTGCGGA AGATGCTAGA 
    GAAGCGCATG AAGCT

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR