1. Home
  2. Mutant Lines
  3. 12-0812-1

12-0812-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20697912 [Map]; Strand: c
      • AT1G55430.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0812-1 - 5-prime edge 
    TNCAAAATAA TCATGANGGA CAAGGGCAAG TAAGACAAAG AANGCAATAT 
    ATCATCTGCT TNATAATCCA AGGCATNANA CGAGTGATGG ATCNCCANCC 
    NGGGCCGATG ACCACNCGNT GCCNGNNGAA NNATATANAC CTCAAGCCCN 
    ANTNCACCTT CGTTTCANAT TCAAGTNATG ATGATCAATT TGAAATTGCT 
    CGCAATGAAG GTAACTCTCG GCAGCTTTGC TCTAATTGCA ATTTGCGTTG 
    TGCACAAACA TTGGTATTCA AGAGGAGAGG TGAATACGAA AGTTTTTGTA 
    CTCTTACTTG TTTGGGAGAT TCTTTGGACT CATAAACTTA CAAGGCCTGA 
    AGACAGAGAA ACAACGTCTG AGTCTGAATC TGCATGATCC ACTGAAAAAG 
    CCTTTCAATT TCGTGTAATT TTATATCTTG AGAGTTAAAT CTATGAAACA 
    TGTTTTGTAC TTATGTTATA GTTTTTTTAN TTTAATATAA TCTTCCANAA 
    ATAAGATGGC ATNATTCANC CTTGTNTTTG ATGAAATNNA NANAGATACT 
    NNAACNTTTN ACCNTNNNNT NTNCNNNNNN NNANNNNNAN ANNNNNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20698017 [Map]; Strand: c
      • AT1G55430.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0812-1 - 3-prime edge 
    GNNACNGNNG NNACGCACTG NATNNNNTGC CTGTCNCGTC TNTAGNGNAG 
    CNTNANTAAN GCAAAGTACG CTCATTNAAT ACCCAAAAAG GATTTGCATT 
    TAATGCATTC GACANAANAG GATGAACNCT CACTAGTNCC ACACCCCATG 
    CATAATACCT CCGGTAAAGN TGAANAANAN ATCATGTGCA TGACAACCAT 
    GAATTAAAGG ATCTGGAAGG GAAGCGNACC TGACNTCTAN NANAAATNCT 
    TCACAACCTT TTTCATGGCA TCTGTAGTGG AAACCACAAC CATATCGGAG 
    GCAACCTATA CAATTGAATA TGACTTTGGT AATAGGCATA TTCGGGTCCG 
    TGTAGGTGTC AATAGTAGGG ACGACGTGGA GGGTAAGTGG GTGTTTATGT 
    AGTGGGTTGT ATATTTTGCG AGGAAGAGAA GCACATGCTT CGTCGAGTAC 
    AAAATCACAC TCCATACATC CATAAAATCT CTGAGAGATC ATTACTGGAA 
    GGGTGCATGC CTCACAAAAC TTGTCTTTCT CGGTAATGGT TTTCTTTACA 
    TGGAGCTTCA TATAATGCTC ATGATGACTG AAATGTTGAA TTGTGTCCTC 
    ATCAATCTTC AGGAATGGCG GNTTCGATAT ACTCCTCGGG TTCTNCAGGC 
    CCTCCATCAA NATCTATTCC ATCCNACANG TTTNTNCATG GTTGCACAAT 
    TTCGAANTGG ATAGNATATT GGCATCCCTT ATCACAANGA GTATTG

AT1G55430.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 1374 Blast hits to 579 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1370; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR