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12-0758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 460716 [Map]; Strand: w
      • AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
        Distance: 0; Region: exon2 (CDS)
      • AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
        Distance: 0; Region: exon2 (CDS)
      • AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0758-1 - 3-prime edge 
    ATTCTAGAGA CCAAATCCTC TTCTTCTTGA CTCATGTTCA CAACTTCCCA 
    CTCAAGACTA CTCACTTCTG TTCCTTGTCG CCACCAAAAT TCAGTTTTCT 
    CATTATATAT AGAGAAAAGT TTTAAAAAAA ACTTGGAAAA ATTAGAAAAC 
    GAAGGTGTTT AAGTTTTCAG CTTACCTCCT TCAGAAGAAG AAGTCACGAT 
    GGAGTTGGTC TTGGTTTGCT TAGTCCTGCG ATGGTTATCC ATGTCAGACA 
    GCACGGTATT ACAAAGAAGA AGAAGAAAGA AACTAAGAGA GAGTGGTCGT 
    ATTTTGAAGG TTGCACACGA ACCATCATTT CTATTTATAG CAACTAACCA 
    AATCAAGTAA CCAACGGTCC AACGGGTTTG GTCGGTTTCT ATGTTAATTT 
    ACTAAATTGG TTTTGTTCTC ATTAATTAAA TTAATTAATT GTTATTGCAA 
    GTTGCAAGTT TGCAACCAAT AAAAACCACA AGTACCCGTG ACTTCATTTA 
    CTACNTTGTG ATGGCTTGGA CTGGAACATA AGTTGTATAA ATATTGATAC 
    AAGCCGTTAA TTAAGATCAT TAATAATCAA CAACAATTGT TTTNAAAGCT 
    ACCANCCCGG GCCGTNGACC ACCCGGCCCC TNTA

AT4G01060.1

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01060.2

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01060.3

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR