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12-0703-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59176 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-0703-1 - 5-prime edge 
    TTGCAGACGA TAAAAAATAG TGTATTTGTC TTCTTGAAGC TCTTCTTCTT 
    CTTCTTCTTC TTCGTTGTTG TGATGTGGTG TGGTGAGGTA TATTGGATGC 
    GTGCAAGATA TTAAAGTGGC AAAGTGGGCC TTCCTCCTTT CTTTTTCTCT 
    CTTATTTCCG TTTCCTATCA TTTTGCCTTT GTCATTAACT TAGCTGATTA 
    AACAATTCAT CAGCTTCTCT TACACAACAT TTTGTTAATC TTTGCTTTCT 
    AATCTTAACT ATGTCTTCTA TTACAACCCC ACTCTTACAT CACGCGCGTG 
    GCTTGCAAAC TCCTTTCAGT GACATGAACA TGATGGTAAA CAAAAATACT 
    AAATGTTATG ATATATTTTT AAATATTGTA TTTGTCTTCT TGAATTACTA 
    GAAACTATTA AAAAAAAAAA ANNTTTCCCC NANNTTTTGN AGGNGGNCCN 
    GNNTNTTAAA ANGGNAAAAA NCTGNCCNAA AAAAAAAAAN GGGNNCTNNA 
    NNTTTNGGNA AANGGNGGGG NNNNCNNAAA AANNATTNNA AAAAAAAAAN 
    NNNGGGGGGG GNNNAAAANT TTTTGGNAAA NNGGNNNNNG NNNNNNNAAA 
    ANAAAAAGNG GGGGGGNNNN TTTCNNTTTN GGGGANAANN TTNNCCCACA 
    AANNNTTTTT TTNGGGNNNN ANNCANNTNN NNNNAANNNT TTNAAAAANA 
    AAACNNNAAA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59060 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0703-1 - 3-prime edge 
    GTCTGCAATG CCCTTACCCT TTGAAGAGTT TCAAGGGAAG GGGATTTCTT 
    GTTTCTCTTC TTTCTCGTCT TCCTTCCCCC AACCACCGTC GTCTCCGCTT 
    TTGAGCCACC GCAAAGCAAG AGGCGGCGAA GAAGAAGAGG AAGAAGTTCC 
    CGCGGCGGAG CCTACCTCTG TTCTGGACTC CCTCATAAGC CCAACCTCTT 
    CCTCCACGGT GTCTTCCTCT CACGGCGGAA ACAGCGCCGT CGGAGGCGGC 
    GGCGACGCCA CCACCGATGA GCAATGCGGA GCCATTGGGT TGGGTGATTG 
    GGAGGAGCAA GTTCCTCATG ACCACGAACA GAGCATTCTC GGACTCATCA 
    TGGGAGATTC CACAGATCCC TCTCTTGAAC TCAACAGCAT TCTCCAAACA 
    TCTCCCACCT TCCACGACTC TGACTACTCA TCACCCGGTT TCGGAGTCGT 
    CGA

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR