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12-0646-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15972190 [Map]; Strand: w
      • AT2G38120.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -803; Region: promoter
    Flanking Genome Sequence: 12-0646-1 - 3-prime edge 
    GGATGGACAG ATCAATAATC TGCATGTTTT TAGAGTTTAA GGAAAACGTA 
    ATCATCCTTT GGTTTGGTTA TATGATCAAC CACTAAATAC AAGTTTTTCA 
    CATCATTCTT ATTCTAGATT ACTAGCTGGA ATAATCTATT CTATGGTCTA 
    AAGTTCAAAT TTTTCAATTT TTTATCCTAC AAAAATTTAA GGAGCAGACA 
    AATTTAAGAC ACCTGATCGT CGACCGAAGG CTCATGTTTT CAGTGATCAT 
    GAGTTTGCAA AATACTCATT AGTCATTAGC ATTTGCCCAT CAAAGAAATA 
    ATTGGGTACT ACTATACGGC ATATACCAAA TACTACATGA TACTAAGAAA 
    TGATTGGATA CTACGCCATA CTCTCTCTTA TACGCATATT AACACATATA 
    GTTGGAGTAT AATCATGATG AAACTAGAAT TTTCCATGTT AATTATCTGA 
    CGGCTAACAT AAATCATTTA GAAATAGTTG AACAGTTTAA TAATTTTATG 
    TTTGAATGAT CTATAACCTA TTTTCTAATT ATTTCAAGTT AAAATATCTC 
    TTTCGTTTAA ATTAGTAAGA TAAAAAAATA TTGGCAGTAA ATATAAATCA 
    TTGAATT

AT2G38120.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Curator Summary
Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.
Computational Description
AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR