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12-0461-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 109260 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -457; Region: promoter
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -649; Region: promoter
    Flanking Genome Sequence: 12-0461-1 - 3-prime edge 
    GTCGGAGCAA GTTGCCATGC ACTCTCCAAA ATAAAATAAA AAACAGACAA 
    AGACTTTAGA CTTGTGACTT TTCGACCTCA TTATGTACTT ACTTACTTCA 
    TCTTCTATTT GGCACCCACA AACAGTAGTT TCCACTTTCT TCCTCAATAA 
    GTTCCATTTT TGGATTCTTT CCTATTTTTA CACAAATTTG TTGTATTCTA 
    AAAAGTTATA TATTCTATTT GCTGGGCTTT AGATATGGGC TGGCTCTGGA 
    TATGTGTGTA ATGGATACAT ATTAGTAAAT AGTTAAGTCC AAAAAAGAAA 
    TTATAAACCC CCTATGTAGT TTGAAAACTG GATCATGTGA CAAAACGAGC 
    AGGGAAGGCC CATAATAAGG CCTAATAAGT AAGGTAAGCC CACAGAGAAA 
    TATACTTACG GGCTTGGATT TCCGAACCTT CCTAAAAAGT GGGACCTACG 
    CGGCTGAGAA GAAAGACGAA GGCCATATCA GACCGGCGAT AACTGAAAAG 
    TCAAAAGTCA AAATTCAAGA GGAAGAGGAG TTTCTAATCA TGTCTCTCTC 
    TGTTTTCTTC TTATTCTTCT ATCAAACCGT CAAGTTGGGA AACAAAACAA 
    AACTCGCAAG TTTAACAACG CGNNTTCTAC CTCCTCCTNA TCGGACTATT 
    TATCTATAGN CTTNGNTAGA TNAATTCCTN NGTTTACTCC TAAGTTNGAG 
    ANCCCCCTTT NTTTTAAC

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR