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Mutant Lines
11-6669-1

11-6669-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19465355 [Map]; Strand: c
- AT2G47430.1 - [+] show detail - Signal transduction histidine kinase
  Distance: -1268; Region: intergenic
- AT2G47440.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -4364; Region: intergenic

GCCGCTAATA TGCACTGTGT TTGGCATGTT ACGATTAGCG TTTTAGAGAA 
TTAGAGTTTG ATTGAAGTGT GTTTTATATA TTGATAGTGG GACATTACTT 
ATAAAAAGCA CAAGGATACA ACAATAGAGA CAGTCACATG TATATCACAT 
AAGTGGATGG TCCTCAATGT GTTGCTTGTA GGACATTTGT GAGTATGTCA 
AAAACTTATT TCACATGGTA CACTCATAGA TTAGCCCCAC TTAGGAGTGT 
CTAGAAAAAG ATTGGGACTA AAGTCTTGTT GGATCGAATA TGATTCCAAA 
CACGTTAATA TTTCCCTAAA ACCCATTTCG AAAAGTATGG AATGATGAAC 
ACATTATAAA TATTTTGGTT GTGCGAAATA GGGGTCAAAT GTAAAGGTTA 
ACTTTGTATT AGTTGATGGA TAGTAAAAGG TCAAATTTAG AAGTATTGGG 
CCAAATAGAA AACATAATGG GCCAAACAGA CCAAAAGAAA GACAACGGTG 
AACGGGTCAG AACATTAAAA CATACATTTT CTCGCTACAA TTAACGCTAT 
CAATATATTT ATAAAACCAT TTGTCATTTC ACTTCCTTAA CTAATCACAT 
AAATGATTTT TTTTTGGGNG TCCCTACTTT TTTTATTTAA AATTTAAACC 
GGAAAGTTAC ATTGGATAAA GCTACCANCC CGGGCCGNCN

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19465471 [Map]; Strand: c
  - AT2G47430.1 - [+] show detail - Signal transduction histidine kinase
    Distance: -1384; Region: intergenic
  - AT2G47440.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -4248; Region: intergenic
Flanking Genome Sequence: 11-6669-1 - 3-prime edge
```
TTAGCGGCTG CTCCTATTAG ATAAGATTCT GTGTCCTGTG AGAGAGGAAA 
AAAAAANNCC CNTGAANCTT TAANCTNCTG NCAAAGTCTG NNANTTNCCA 
NCCCGGNCCG TCANCCNCCC NNNCCCTNNA GNNAGTNGNT TTNCCGTCAC 
CCNCCCNNNC CCTNNAGG
```

AT2G47430.1

Model type: Protein coding
Short Description: Signal transduction histidine kinase
Curator Summary: Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.
Computational Description: CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47440.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link: InterPro Scan - TAIR