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Mutant Lines
11-6651-1

11-6651-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 10376913 [Map]; Strand: c
  - AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 3; Position: 22769288 [Map]; Strand: w
  - AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-6651-1 - 3-prime edge
```
CTCAAAGGTC AATCCGAACA CTGTAATATA CAACATTCTC ATAAACGCAT 
TTTCTAAGCT GGGGAATTTC GGGCAAGCGC TCTCTCTGAA AGAGGAAATG 
AAGATGAAGA TGGTGAGACC TAATGTTGAA ACTTACAATG CCTTGTTTAA 
GTGTCTTAAC GAGAAAACCC AAGGAGAGAC ATTACTTAAA CTGATGGATG 
AGATGGTCGA ACAGTCTTGT GAACCAAATC AGATCACAAT GGAGATTTTA 
ATGGAGCGTC TCTCAGGTTC TGATGAGTTA GTTAAGCTGA GGAAGTTTAT 
GCAAGGCTAC TCTGTTGCTT CGCCGACCGA GAAAGCT
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 10332688 [Map]; Strand: w
- AT5G28370.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)
Chromosome: 5; Position: 10376797 [Map]; Strand: c
- AT5G28460.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

CCTTTGAGTG CAAACCCATG TCCTTAAAGA GCTTCAATGC TTCGTCTAAT 
TCGCCGACTG AGCAATAAGC GTCAATCACC GCTCCATATG TCGTGACAGT 
CGGGTCTAAC CCGTCTTCTC TCATCTGCTC CATCATTCTC TCAACACTCT 
CGAAGTCCTT GTGTTTACCG AAAAACGAAA TCAGAGTGTT GTAAGTGATG 
GAATCAGGTT TCTTCCCTTC TTTTTCCATA TCGGTTAGCA TCTCATAGAC 
TTTCTCTGCA TTATTCTTAT CACAAAACAA CCCAATAAGC ATGTTGTAAG 
CCAATAAGTC AAGAGAAAAC CCTCCTTCTT TCAGTTTCTC CACCACTCTA 
ATGGCGTCAT GATCCCGTCT AACTTGGCAC AATCCAGAGA TCAAAGCATA 
ATAGATCTTT GCATCAGGAG AACAACCAGC TTCCAACATT TTTTCATACC 
AATACATAGC CTTCTCTACA TTACTGACGC TGCAACAAGC ATGAATCAAT 
GTCATATAAG TAACCACATT CCCTTTCACG CCTTCCTTTT CCATATCCAT 
AAAGAAAACA ACCGCCATGT TCAATCCATG GNGCCTGCAC ATCCCACCAA 
CGATNGGNNT TAACAGNNAC CACATTAGGG NTAATCTNGN CCTCTTTCAT 
CCNANAAACG ACTTNTTTAN CCNNNTNAAG CT

AT3G61520.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28370.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 52907 Blast hits to 14569 proteins in 306 species: Archae - 7; Bacteria - 68; Metazoa - 890; Fungi - 845; Plants - 49290; Viruses - 0; Other Eukaryotes - 1807 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28460.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G61520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR