1. Home
  2. Mutant Lines
  3. 11-6594-1

11-6594-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58907 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6594-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTCA GGAAGACACC GTGGAGGAAG AGGTTGGGCT TATGAGGGAG 
    TCCAGAACAG AGGTAGGCTC CGCCGCGGGA ACTTCTTCCT CTTCTTCTTC 
    GCCGCCTCTT GCTTTGCGGT GGCTCAAAAG CGGAGACGAC GGTGGTTGGG 
    GGAAGGAAGA CGAGAAAGAA GAGAAACAAG AAATCCCCTT CCCTTGAAAC 
    TCTTCAAAGG GTAAGGGCAT TGCAGACGAT AAAAAATAGT GTATTTGTCT 
    TCTTGAAGCT CTTCTTCTTC TTCTTCTTCT TCGTTGTTGT GATGTGGTGT 
    GGTGAGGTAT ATTGGATGCG TGCAAGATAT TAAAGTGGCA AAGTGGGCTT 
    CCTCCTTTCT TTTTCTCTCT TATTTCCGTT TCCTATCATT TTCCCTTTGT 
    CATTAACTTA GCTGATTAAA CAATTCATCA GCTTCTCTTA CACAACATTT 
    TGTTAATCTT TGCTTTCTAA TCTTAACTAT GTCTTCTATT ACAACCCCAC 
    TCTTACATCA CGCGCGTGGC TTGCAAACTC CTTTCAGTGA CATGAACATG 
    ATGGTAAACA AAAATACTAA ATGTTATGAT ATATTTTTAA ATATTGNATT 
    TGTCTTCTTG AATTACTANA AACTATTAAA AAAAAAAACN TTTCCCCCAA 
    TTTTTNGANG NNGNNCNTGN TTNTTNAAAT GNNNTAANNC TTNCCCNAAA 
    AAAAAAAAGG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR