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Mutant Lines
11-6284-1

11-6284-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 4792786 [Map]; Strand: w
  - AT5G14820.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
2. Chromosome: 3; Position: 23134228 [Map]; Strand: w
  - AT3G62540.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-6284-1 - 5-prime edge
```
GTTTCCATGC TCGACTGTTT GCAGAAGTCC CGGATCATGA TGGTATTATA 
CCATTAGGGC AAGGTCCCTT GGATTTCATA ACATGGAACA ATTTGATCGC 
ATCTGATTTT TTCCTACTCC TCAACAACCC TTCAAGCATT ACGTTGTGAG 
CTACAATGTC AGGTTTCAAT CCGTGATCAA TCATATCATT CCAGATTCTA 
GCTGCTTCTA TCAAGTTCCT CACCCTGCAC CAACCATTGA GTAGAACAGT 
GTAAGTCATC ATATTAGGTG TAAACCTCTC CTTCAGCTTA TCAAACAGAA 
CCTGAGCTTC TTTTCCAAGC T
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 23107198 [Map]; Strand: w
- AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATGGAAACTG CCATTGAGTA CTTTGATGAC ATGGTTGATT CCGGGTTGCA 
ACCTGATGCT GCGGTTTACA CAGTGTCTGA TCACGGGGTT TGGGACTCAG 
AAGAAGCTGG ATACTGTTTA CGAACTGCTC AAGGAGATGC AAGAAAAGGG 
ACATCCTCCG GATGGCAAAA CGTATAATGC GTTGATCAAA CTGATGGCGA 
ACCAGAAAAT GCCGGAACAT GCCACAAGGA TCTACAACAA GATGATCCAG 
AACGAAATTG AGCCATCGAT ACACACATTC AACATGATAA TGAAATCATA 
CTTCATGGCG AGAAACTATG AGATGGGGAG AGCAGTTTGG GAAGAGATGA 
TCAAGAAAGG GATTTGTCCT GACGATAACT CCTACACGGT TTTGATCAGA 
GGGCTTATAG GTGAAGGCAA GTCGAGAGAG GCATGCAGAT ACTTANAGGA 
GATGCTTGAC AAAGGAATGA AAACCCCTTT GATTGATTAT AACAAGTTTG 
CAGCTGATTT CCACANAGGG GGGCAACCGG AGATATTTGA GGAATTGGCA 
CANANAGCTA ANTTCTCANG TAANTTTGCT GCANCANANA TCTTTGCNAG 
ATGGGCTCAN ATGACTNNAA NGAGATTCNN ACNNANGNTN NTGGNANANN 
NNNNACTNNN GGGCGGNNNN CNGG

AT3G62470.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62540.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G14820.1); Has 36772 Blast hits to 11783 proteins in 282 species: Archae - 3; Bacteria - 24; Metazoa - 449; Fungi - 549; Plants - 34543; Viruses - 0; Other Eukaryotes - 1204 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14820.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 37965 Blast hits to 11999 proteins in 283 species: Archae - 3; Bacteria - 24; Metazoa - 443; Fungi - 549; Plants - 35727; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink).
Link: InterPro Scan - TAIR