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11-6279-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 126035 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron11 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: 11-6279-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    GCGTATAAAT AAGGAGAGGT GGCTTTGGGG GAAAGACATG TTGAATCAAG
    TGGAGGATTA GTCGCTATGA GACTATCGTA TGGAGAGAAT ATATTCGAAG
    AGATGCCGAG AATCTAGTCT CGTTCTTCAT TTGTTTTGAT TGTTCATTCC
    TTGTAATTCC TAAACCTTGA GAGTCTTTAT TAATCTATGG AACTTTATGA
    AAGATAGGCT TTAATCCAGT ATTTACATTG AGATTCATAA TACTAAAGTC
    TATCAGTATT GTGTTGCATT CTGTTCTTAT TATGGAATCC GGATCAATGG
    TATGAGCATT TGCACAGATG ACATCGAAAG AGCATTGCAG AGTTGCCTGG
    GAAGCGTTTA AAGAGTGCGA ATATTTGTGA ATTGTGACAG AGAAGCCTTG
    TTAGGTATTT ACGACTGTCA TTATACTATC CAGGATTCTA CCTATAATTA
    GGGCTATTGA AAATAATGTA ATAGTGCCAA ATGATCANAT TGTGCTGGTT
    ATTTCACAGG TCTCTGCNNA TATAACANNN TAANCTNCCN NNCCNGNCCN
    NNNNNCNNC

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR