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11-6270-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 279802 [Map]; Strand: w
      • AT4G00670.1 - [+] show detail - Remorin family protein
        Distance: -616; Region: promoter
      • AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-6270-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TACTTACTCA AGGCTCATCT CACTAGGATC 
    AGTTGCTTGC AATTCAACTT GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 279809 [Map]; Strand: w
      • AT4G00670.1 - [+] show detail - Remorin family protein
        Distance: -623; Region: promoter
      • AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-6270-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGACATCAT CAAAGGACGA CTCAATCTCT GAGCAACAAC AACATTCTAA 
    TGCATCCTTT ATTCGTTTCA AATTGTTAAG CT

AT4G00670.1

Model type
Protein coding
Short Description
Remorin family protein
Computational Description
Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT3G61260.1); Has 353 Blast hits to 353 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 8; Plants - 326; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00680.1

Model type
Protein coding
Short Description
actin depolymerizing factor 8
Computational Description
actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Link
InterPro Scan - TAIR