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11-5996-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 29122 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 251; Region: intergenic
      • AT4G00070.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 549; Region: intergenic
    Flanking Genome Sequence: 11-5996-1 - 5-prime edge 
    TACTCACACG CGTAATGGAG AGGGTTTAAC TGTTGACCCA AAGGGTGCGG 
    CGGAGAAGAC GAAAAGGAAG AAGCTCGTGG CCAACAAGAT CCTTTTTTAT 
    AGCACCTTCC CTTCACTCTT TAAGTAAATC TGCACACTTT TATTCTCTCC 
    ACCACACATT TAAACTCGAT GAGTGTCTCC TCGATTCTCC AAGACATACC 
    ACTACTGCAA TGTTATAATC ATACCGGATA CTGTTGCCAA TGGGCTTGTT 
    CCGGTTCTTC TAATCTATAG AAATACTATG TTCTGTTACT TTNAGCCCAC 
    ACTCAGATTA TCCCAATACT TNGGCAGACA ATAATTTATA TCGGAAACGC 
    ATATGTACAT CATTATNCNN CCCCATTAAC TTGTTACTAC TGTATATATA 
    AACTTAACCT GNGGAAAAGT TGNNGTTATN CCTNCNAAAG NNCNTGGAAA 
    CATATNNANA GATGCGGNTT CCCAACTGNG GGGATNAAAA TGANNANCAN 
    ANGGGGGGNG NAAAAAAAAA AAAAAAANTT TNNGCNNNNT AATCANNCCC 
    NANCNNANAA NACATATTNN NNNNANNNNN NANAAANTNG NNANNTNNTT 
    NNTNTNNNNN NCNNNCCNAN AAAANAAATG NNNTTNNNNN CNAANTAAAN 
    ATNNCNCNCN NNCNCCAA

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00070.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G36950.1); Has 668 Blast hits to 668 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 45; Plants - 506; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Link
InterPro Scan - TAIR