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11-5784-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60528 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -1242; Region: intergenic
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -2882; Region: intergenic
    Flanking Genome Sequence: 11-5784-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    AATTCGCATA TAAAAGATAG ATTCAGAATC TGATATTGTT TATACTTTTT 
    TTTTTNNTTN GATNTGGTTA ANNCAAAGNA ATGGGTTGGC ANAAAAAAGA 
    AAANGCTTTT NCNTTNNCAN NAANCCNNNA NAANNAANCG NGNCCCCNTN 
    CNTNGCAAAA TGGGCCCNAT TTAAATTGGN CTTCNTNAAT NNCCCNCCTN 
    TNTTTNTNGN GGTTTTTNCN NATGGCTTNA TCCATTNNTT AATNANNGGG 
    TTTCCCNTGG GNANANANNT TAANATNNGT ATATATNGGG GNATGGGGNN 
    CTCCCNTNGN CGGCNNAANA ANGGACNNCC NCNCGTNNTT TNTAAATCTN 
    TNGGNCNTTA ANCTGGCCNC AAAAAAANCN TCNTNCNCAN ATNTTNANNC 
    NCTTTTTNCC TTCAANCAAA AANANGNCCC AAAAAANGTT NGTTTTTNTN 
    TCCCCGTAAA TNTNTNTAAA NCCCCTNNTT NGTTNNAAGT NGCCCANNAA 
    NGTTCNAAAN AAGGNCAACN NTNCGNNTCN NGTTAGGTTA AACCACCAAA 
    ACCAAACCAA ATTTTTTGGA GGAACCCCCA ATNTNNNCAT AGTTTTTTTT 
    CCCNCTTGGT TAAAATTTAA AANTTAAAAT NNGGCCCCNA NCAAAAAAAA 
    AAAANANNNG GGGGNCCCCC CNNTTTTTNN CCCCCCCCNN NNGGGGGGNN 
    NCCCCCCCNC NNGGGGGGGG GGGGN

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR