Home
Mutant Lines
11-5689-1

11-5689-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 108484 [Map]; Strand: c
  - AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
    Distance: 0; Region: intron1 (CDS)
  - AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 11-5689-1 - 5-prime edge
```
ATGACAATAG GGTCGTTTTT CTCTTCTCTC TTATTCTGGC GCAATTCTCA 
GGTAACCTCA ATCGACTATT CTCTGTTCTA CTCCTTTTTT CTTTATCATT 
TTAAAAATCC TAACATTGAA AATAAAGTAG TTAAATAGAG TCAACGAAAA 
CATTGTTAAT GAAACAGTGG TGTGCTTAGC ATAACGAATC AGACAGACAA 
AAAGTGTCTG GATC
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 108548 [Map]; Strand: c
- AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon1 (CDS)
- AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
TAATTGTCAT CAGAAAGTGA AGATCTCGAC TAAGAGATGA GATGAGGTTA 
AAAAGAAATG TGGATCTCGA AACTTAGGAG TAAAACAGAG GAATTGATCT 
AACGAAGACT ATAGATAAAT AGTCCGATGA GGAGGAGGTA GAAGACGCNG 
TTGTTAAACN TTGCGAGTTT TGTTTTGTTT CCCAACTTGA CGGTTTGATA 
GAAGAATAAG AAGAAAACAG AGAGAGACAT GATTAGAAAC TCCTCTTCCT 
CTTGAATTTT GACTTTTGAC TTTTCAGTTA TCGCCGGTCT GATATGGCCT 
TCGTCTTTCT TCTCAGCCGC GTAGGTCCCA CTTTTTAGGA AGGTTCGGAA 
ATCCAAGCCC GTAAGTATAT TTCTCTGTGG GCTTACCTTA CTTATTAGGC 
CTTATTAT

AT2G01180.1

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01180.2

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR