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11-5156-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57508 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5156-1 - 5-prime edge 
    TTTTGAAAAA ANACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTATNNCN TNTCTCGACG NGAAAGCCTC NCACTGGCAG 
    TACGNTGGAC TAANCACTTN NGNTNGATAC TCCGNGANGT NACTGTGCGT 
    CACCGGNGAG AAACCCATCT GTANAAACAT NGNCTTGCCA CCGTNATCAT 
    NGGCCTTTNT ATNGGACGGC TACGATCCAA CACCAGCTAC TCTATCTCCG 
    GCTGNATAAG AAACCTCTCG ATCNTCTGCA TTGCGTCGAG GNTGGCNTCG 
    ANNGNTGTCT NGGGATTNTA AGAGAGCGGN GTGAGANTGC AGCGAGTGGG 
    CCGAGCTGTT GAGAGAAGGG CAGATNNNTC CTCNCGCNTC CTNTGTNNAN 
    AGCACACGNT GATNGNNGTG AGNATNGANG CTTNCTCNAG AGGNGAGGAC 
    CAANGNGGAG GAGGCGAGAA CGGACGNCGG NGGANANNGN TANAGGNNAC 
    ANGTTNCNCA NTACNGCAGA GNNAACGCNC NCCAGATGGA TGCNNAGGTG 
    AGCCAAAGAN ANACAAANTT GGNANGTNCA NTGGNAGANT GNCNANNNNT 
    NAAANGGGNN GCCGCTTGAA GGTNGNNNNT NAGGNAGAGN NCNATNTTAG 
    AATNTTNCGA GNNNGTNANN CTNNATNAAG CNATATNNAN GGGANTTTTN 
    AGNNANNGAT GTAANNNNCN GTNNTCNCNN GGGGANTNAN NNNTNCGNGN 
    AAAAGGNTTC CNNGTNNNCA NAGTGNAGCN CGGCNNCNNA GGGTCNATNA 
    TGNCGGNNGG AGAGGNATAA NNAGNNNAAN NNGAANNANA ANAAANAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57491 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-5156-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    TTCTCCTATG TTGGCAAAGG ACAGAACTCG TCGGAGTTTC AGCATGGAGA 
    TGTCGCTCCT CCTGATTTCC ACCGGAGTTT CAATTATTAA AAAAATATTT 
    TCCTTAATTC AATTTATCTT AAATGACAAA TTTTTAGTTT CTGATTTTAT 
    TTTGCTCAGT GCGATGGATT TTTAAATTTA AGTTTCACAC AAATATATAA 
    ATTTTTGTGA GAAGTTAATT AATTGTCTGA TTATCAAACA CTTATTGTAT 
    AACACATTCA ATATATATTA ATTGTGGGGA TTATTTTTGA TCGACTAAAT 
    AACGTGATAG AATAATGTGC TTTTTCAACT CTCTCAAAAT GGAATCTATT 
    CCAAACATAT ATGCCATGGT TCTTTACTTC GACAGGGTAC AAATATCTAA 
    ATTTGATATT TTTAGATACT TTTTCAGACC TATTGCGGAT ACTAAGTAGC 
    AGTCAAAAAT TTGTATCCAT TTTTCATGAT ATTATGCATG GATTAGATAT 
    ATCATGGCGA ATT

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR