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11-5153-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30142799 [Map]; Strand: c
      • AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -153; Region: promoter
    Flanking Genome Sequence: 11-5153-1 - 5-prime edge 
    CTCATACGCA ACGCAGCACC GTCAATTTTC TGTGAGGATA CTAAACTACT 
    ATGTAATGAT GTCGACAAAA GAGTGAAAGG TGGGTCCCGC ATTTGCCCAT 
    GTGGTTATGG TCAACGTGTC AAAGTACTAG CNGGCTGTGT TTTAATCCGA 
    TCTTTTTCTA TCAATCCATG GTCCCGTAGA ATAATTTCAC TATTTTTTCA 
    CTTGGCTGGT GTCAACTTAG AGACCAATAA TATATACACT TATCTTTTAC 
    AGTCTAAATT TAATTATGCG GCTTACCATT ATATAAGACT CTGGTAGACT 
    ACTCTCATTA TATACATTAT AAAGATACTG ATGAGTGGTT CTTGTTTAAT 
    GGAGTTTTAA ATTTAAAAAT ATTTGGTAAC CGAGTGGATC ATCATGTTAT 
    TGAGAAGCAC ATCTGCTCCG ATACTGAACT CGTGGCTTCC ACAACACTGC 
    TCGAGAGAAT CGTCTCCGGA ACCGGAGTCA CAGCTCTGGC GCCGGTCAAC 
    ATCATTGTCT CTTTTCTCAT CAAAGTCCAT AGATGGACAC ACTGGGGAGC 
    AGCTGCACCA AGCTCTCTCT GACAACAAGG AGATTATTAT TCTTAAATCA 
    AAAAGCAACG AGCACAGCTA CAAAACTCCA ACATCAAGCA GGCAACGCAG 
    GTCATCTTTA GATGAAACAC GCTACACAAA AAAGACTTTG GATCGGTCAT 
    CACCCTTTCT TAGTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30142915 [Map]; Strand: c
      • AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -269; Region: promoter
    Flanking Genome Sequence: 11-5153-1 - 3-prime edge 
    CGTATGAGAT GGAGACAAAC TCTAAATGTA ACTGTCAGCT ACAGTGTTAT 
    CTTGGATCGA GACAACAGTC GACACGTTTA AGAGTTCAGC TGACGAATGC 
    CGACAAAGAC GGAGACGGAG ACGTTATACN GGCAAGCNGG TGAGATCTCT 
    CTCAGTGCTT TCACATTCAT CATCACTCTC ATGCTTTTTA TCAACTACGG 
    GCTCTGTTCT TTTGTCACGC TATATGGATT AAATGTATTC GGTAGATAAT 
    AACGTTTTGA GGGTTTCTTT CGAAGGTTTG AGAAGATAAA GATACGTGCA 
    TGATCCACTT TACATAAGAT TCTCTAGGAT CATTTATGGA GCTGATAAAT 
    ACTGCATTAC GAATCTGATT TATGAATATT ATTATATGAA TCTGATTGGT 
    CCTATATATC CCATTTTTAC ATCAACATAA GGAATCACTT GGATGTGATG 
    CCTGAGGTTG AAATGTTCGA TATTCAATTT CTTCTTATTT TGCGGAGGCG 
    CAGTCGAGTT ATTCATAAAT GTAATTAAGA TCCGATATTG AGACGGTCGT 
    TATCTGACAG ACAGGTAAAC CAAAACGTAC GGTGTGGGAT TGTGCTTTGA 
    TGACTTGCGA AAAGGTCTTC GTTACTGGAA TTTGGAACTT TATGCTTANT 
    AGGCCCATAT CCTTATTTTT CTATTCCGGC TGCTCTTTGT AGGCCCATAA 
    CAATTCAGGC CCACANTN

AT1G80130.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR