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11-5112-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1461303 [Map]; Strand: c
      • AT1G05085.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-5112-1 - 5-prime edge 
    ATNNNGATTA ACNGCTNTGA TCACNGCAAA NATNTCANNC GNACAACCNG 
    AGAGCGGNAA CAACGAGGTG AANTAAACNG GAACTATNCN NTAGAGGATG 
    ACGAGACTAG CGTTTGNCTT TCCACGCGAG NCCTANCNNA TTGNTTTTTN 
    CTAGTNCAAN CTAAACGTTT TNGGAACTAN AATATGNCTA TATGATAATG 
    TGGATAATGG TAATGGGATA TGTTGAGACT TGAGATGACC AAACACTTAC 
    TTTGTTTGTT TTNTGCCCAC GGATTACGGT TAACTTCANA CGAATGTTGA 
    CAAGTATAAC GTTGACTACT ATAGACCACT TATTCCATTT ACATGTTTCG 
    ATATTCCTCA CATCAGCTGT CCAACGAGGC TTGACCATTT TTCAATAACA 
    TTGGTTGTTT TTTCCCCATA CAATTTCAAG AACTAAGTAA GATTCCAAAC 
    ATCAGAGGGC CAGCAGCGAG TCAATGTTTG ACTTTAAACC CAAAATTTGT 
    TTTATGATGT TGTAAGAAAA GACTCATTAA GAGCGACCCA NCAGAAATAT 
    GTGAATAAAC AATTAAACAC CCTATGAATC ATAGGCTATG ATGTTATTGT 
    TAANACTGTA AACTAGGAAA CTAAGCCCTN TGCAACTTAT CCAGTNTTTG 
    GAAAAAGGAA CACTATCAAG AAACCGNAAA TAGTGTTTTT ACTTTAAAGA 
    AAGAAAAANA AAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1461397 [Map]; Strand: c
      • AT1G05085.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-5112-1 - 3-prime edge 
    NNTGGTANGG CTGCNGNNCT NGGTCAANNC TATTNGGCAA ANCAAGAGGC 
    GTNCNTCNNT TGCTTACGTG TCAAGGANAC ANCTNTGGNT GTNNGGTCCA 
    ACNTTGGAAT NGATNACNGC GNCCTGNACA CGACCTNCTC ATTCTCNAAT 
    CCACNTATNA ATGGGACATG CCTGCTCGCA CCCANGATTC GCAACATGCT 
    TTCCTTCTCG NAGGTNCCAG GCNCAATTCA AGTTANTNNA TGGNCGTCTT 
    CTCATANGCT TACTATATCT TAACATCTTC CATTTTGCGT TGTCACAGGG 
    TCCTTACACC ATACTTCCGT TGATTGATAG GTATGATAGT TAAGCTCAAT 
    AAATGACCAC ACTTGNGTTT CTTTTTGTTG ATNATNANGG TTCTTGGGTT 
    TCTTTGATCT TAAGCATAAG GGACAAGCTA ACATANCCCA NGTCGGGGAT 
    GGCTTTGCAT TTAAAAATCT NAGATGGGGC TATNGNGTCC TTTNACTTGN 
    GTGTNACCGT GATTNAAAAT CATCNACAAN TCANCACATA TATACTTAAG 
    TAAAGAGATC TTCTACCCGC ANTTTGTGAC AATCAACGTA AATATGTTCT 
    CTTCNAGCCC AATGTCTTGG CACAATAACT GGNTCCCTGT GNGATTTTCA 
    CAGAANCCNG ATCNNANTAN TNCAANCCCA GCAGTTNNAT ANAAAACCAT 
    GGANCNCCGT TACATGAGAA ATANGGG

AT1G05085.1

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR