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11-5066-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 459795 [Map]; Strand: w
      • AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
        Distance: -677; Region: promoter
      • AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
        Distance: -680; Region: promoter
      • AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
        Distance: -736; Region: promoter
    Flanking Genome Sequence: 11-5066-1 - 5-prime edge 
    TTCGTAGTGA CACTCATTTA CTTTTGTGAT GGACACGTTA TATATATCTT 
    AAATATTAAA GAGACATGAT TGGGGGATCA TTGTTTTAAT TTAAATAAGA 
    TTATATTCTT TTCATGGTAT TAATCCAATT TATATGAAGT TATGTGTTAT 
    TAGCAATTAA GCTAAATGAT GAAAACAATC AGTTAAGTGA TACAAACTCG 
    CCGAGAAAAC ATGAATGGTT GAAAATATTA TTGTGTTTTA CAAACGTACA 
    TGAGGACAAT AGTTTTGTAA GTTTTTCTTA GGCATTGAAA AATGTTTGAT 
    ACAAAAAGTA ATGTTAAAAT AATTAAAAAT GATTGTTTCT TAATATATCC 
    AAAATTTCAA TCTATTATGA ACAAAGGGAG TACAATTTCT GATTGAATGA 
    ACTGGAATAG CAATCANAAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 459679 [Map]; Strand: w
      • AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
        Distance: -793; Region: promoter
      • AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
        Distance: -796; Region: promoter
      • AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
        Distance: -852; Region: promoter
    Flanking Genome Sequence: 11-5066-1 - 3-prime edge 
    ACTACGAAAG ATGAAAATGG GTTGGATACT TGCATCCTCA ATCATGCAAA 
    TTTGGTCCTA AATTGGCTTT AAGCCAAAAA AAACAAAAAA CAAAGTGGTC 
    CTCGCAGTAA GCAACGTGTC GTGTGTTCGT TACAACTTGC TTTATTGGTT 
    CGGGTTATTC AACACTATTA CCTGCAATAA AATCTAGTAA CAACTTTTTT 
    CATAGTATAT CGATCGTTAG ATCATCTATA TATACATAAG AGGACCTATA 
    AATAAACTTA CAAGTCCACG AAGGGAATAT CCCCAAGGCA AGACTATATT 
    TAATTGCCAT CCCTAGCAAA CTTTCAACTT AACCTTTTTC AGTGCTAACA 
    ATATATTCTC AGTAAATTCC GAATTTAAGT TTGGAATGAG GAAGAGAAAC 
    GTATATTCTC AGACTAACAC CTGATTTAAT TAATGTGGTC TTGTTCTTTA 
    CTAAGTTAAT ATTATGAGTG ACACATTAAC ACTAACCGAT TTTATTAATG 
    GGGTTTGTCA ATTGTCATTT GGTTCANTAA GAAGAAGGAG AAATATGTTT 
    TTGTCGAAGC GTNCTNAAGC T

AT4G01060.1

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01060.2

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01060.3

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR