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Mutant Lines
11-4954-1

11-4954-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 785915 [Map]; Strand: w
- AT4G01820.1 - [+] show detail - P-glycoprotein 3
  Distance: -586; Region: promoter
- AT4G01830.1 - [+] show detail - P-glycoprotein 5
  Distance: 0; Region: exon11 (CDS)

AGGTGGTCCG GTTCACCATC ACCCGATCAA GCGCGTCTTG AACCACCCGC 
TCCGATTCTG CGTCCAACGC GCTCGTCGCT TCGTCGAGTA ACAGAATCTT 
CGGTTCTTTC ACGATGGCNG CGTGCAATCG CCACGCGCNT GCTTCTGTCC 
TCCTGACAAT TGTATCCCTC TCTCTCCCAC CACCGTATCA TAACCCTAAA 
TNTGGAAAAA TTAAAGAAAA AGNATTATTT TTTGGCCTTG CGTAGTAAGT 
AATCTCTCTG GTTTTCAAAA GTGAATAAAA GTCTTGGTTT GATACCTTTG 
GATACTANAN ATGAACCTGT GGGCATTAGC TAGCTCGGNA GCAGCTATAA 
TCTCAAGCCT NGGGGTGGNT TTCCTNNNCC CGGCCTTTTT NCAANAAGCA 
AGNTGGGTNG TATCGGGGNC NGNTGAANAN NAAAAAGGCT TTTGGGCCTA 
AAAAACCCCA ATTGNNNGGG TNTTAANCAG AATGNTAANT GCGAGGTTTT 
TGNGGCCCAA ACTCGNGNTA NANGGTTANT TAAANCGGAT TCCGNAAAAA 
NAAAACCTTT GGAAAAAGGG GAAAANCCCG GNAAATTTTN TNGAAACCAA 
TTTTTNCAAA AAAAAGAAAA NNGNTGGNAA AANCCNTTNA AAAAAAAAAA 
AGGGGGGGNT TATNTNNANN CCCAAAAANG NTNNAAAANN NCCCNNANTT 
TTNGNANNTT TANNAAAAAN NNTTA

AT4G01820.1

Model type: Protein coding
Short Description: P-glycoprotein 3
Curator Summary: member of MDR subfamily
Computational Description: P-glycoprotein 3 (PGP3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 5 (TAIR:AT4G01830.1); Has 830190 Blast hits to 386538 proteins in 4151 species: Archae - 14649; Bacteria - 648558; Metazoa - 17709; Fungi - 12207; Plants - 9512; Viruses - 34; Other Eukaryotes - 127521 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01830.1

Model type: Protein coding
Short Description: P-glycoprotein 5
Computational Description: P-glycoprotein 5 (PGP5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 3 (TAIR:AT4G01820.1); Has 845817 Blast hits to 392712 proteins in 4168 species: Archae - 14768; Bacteria - 661377; Metazoa - 18002; Fungi - 12658; Plants - 9684; Viruses - 32; Other Eukaryotes - 129296 (source: NCBI BLink).
Link: InterPro Scan - TAIR