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11-4271-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3119602 [Map]; Strand: w
      • AT3G10113.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -211; Region: promoter
      • AT3G10114.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-4271-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTCAGGTAAC GCGTTAGGTT TGAAGCTACC ATCTAACCAC GGCTCAATCA
    TGTTCTTCAG GTAACGCGGA TAACTAGAAT TTGAATTATT ATCATCTTTT
    CTCCCAAACG TCATGAAATC CGCCAATAGA CTTGTACGCN TTGAGCTCTG
    TATCTCTCTC CCCACAAAGG ATCAAACTTA GCGAGCACGG CAATAGCGTA
    GAGAAAGTAA CCAATATGGT AATGATGATT ATAATATATA CCGAACCCGA
    AATCAGCTTG TTTCCACTTC AGGATCGAAG TGAGGAACTA AGCAGCAATG
    TAGAAAATGG AAGTTGCAAT TCCAATGAAG GAATTAATCC TGAAACCAGC
    AGTCATTGGA TTGAAAACGT TGTCAAGGTA CTATATGTTT TGTCACAACT
    TTGGAGAAGA GACAAATTTC AGATTTTGCC AGTGGATCTT ACCTCTCCTC
    TGTGTATTGT TCTTCAAGGT TAGGAAACCG TACACAGTAA CTAAGCAGAG
    AGAGAAGTGG AGTGAGGAAG AGCATGATAG GTTTCTTGAA GCTATCAAGC
    T

AT3G10113.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G18330.2); Has 1478 Blast hits to 1458 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 27; Plants - 1117; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10114.1

Model type
Pseudogene
Curator Summary
pseudogene of glycosyl hydrolase family 81 protein
Link
InterPro Scan - TAIR