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11-3891-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 70086 [Map]; Strand: c
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -211; Region: promoter
      • AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -202; Region: promoter
    Flanking Genome Sequence: 11-3891-1 - 5-prime edge 
    CCAAGGGGTT TGTTTACAAG TTCATTTATT TCCTCAAGGG AAAAGTTAAA 
    CTTTTTCTCC AAGGGTCAAC TCCTTAAATC TCGCCATCTA TAAAAGTCTA 
    TCAGATATTA TATGAATGTG TCGTTTTCGA ACAGCAACAA CTGTATTTTT 
    GAGTGATCGG AAAAGATTTT CCAAAGTATA GAAGAAGACA AATACGTTTT 
    ACAGAACTAG GGATAACACA AACAATTATG TCCACAAAGC CCCAATGATN 
    AAGGCACCAC CAAAGAAAGA ACGCAAATTG TTAAGGCCTC TCTTCTTCCT 
    CATAGGTNTC ACATAGCCCT AGTTTCAANA NAAACCTATN GGGTTTTNNA 
    AAGCTACAAC CCGGGCCGTN AACCCCCGNC CCCTTAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 70202 [Map]; Strand: c
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -327; Region: promoter
      • AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -318; Region: promoter
    Flanking Genome Sequence: 11-3891-1 - 3-prime edge 
    CCCCTTGGAG AAGAAGTAAA AGATAAACAT AGACGTGGCT CTATATATTA 
    GAGAAACCCA CCCAGTGGCT TAGGCTAATC TAATCTGGTG TTGAAAATGG 
    GGTTTATAAG AAGCTACTTC TCATTCGTCT GCGGAACCAT CTGGGGGATA 
    TATATAGCGC AGAGCTACAA CGTTCCAAAC ATAGAAAAGG TGGCTCAAGC 
    AGCTTATTCC ATGGGCATGC AGATGGAAGA AAGATATCGA AAGACAAAGA 
    CCAAGCCCAA AGAAGACTTC CAAGACTAAA ACATGTAACT GTTTTCTTTC 
    TACTTTGTAT GATGCGTTTG TTTTCTTAAT CAATCTGATT TAATTCCAAT 
    CATAAGAACG ACTCTTGAGA TCTTACTACA GACTCGAAAG TGTGTTTAAA 
    TCAATAACAA GAAACCTGCC ACAAAATCAC ACCTGTTCCT GTGCTACAGC 
    TACTGATTTT ACAGCTTAAA TATAAAACTT TTAAAAAAAA ACCACCTCCA 
    TTTTACGAAA ATCTGGTCAA AAATCTTAAG AACTTTGCAN GATTTGATGA 
    TTAAAAGGAT GATGAAGCTA ACCCCATGGC GTTATATCCC GGTTCAATAA 
    GTAGCCAATC ACGCAACCGA GCAGACCCAC CAGCAGCATC AAGAGCCAGG 
    GAATGACCCC CGACTGCTTC TTGCTGGTTC TTTCCTCAGC ATTTCCTGAA 
    TNCCAATATA TACATGTNTT CGTTTATG

AT4G00165.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00165.2

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR