1. Home
  2. Mutant Lines
  3. 11-3870-1

11-3870-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26664422 [Map]; Strand: w
      • AT5G66790.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -720; Region: promoter
    Flanking Genome Sequence: 11-3870-1 - 5-prime edge 
    CTTTTGTAAC ACTCGTTGAA TTAGTAGTTT TTGTTGATTG TTGAACATTC 
    CCTTAATTTG ACTGTGTTTG TTTATTTATG AACAAATCTA CGGTTTTTTA 
    GTTGAACCGT CGAGGAAAAC ATTCTTAGAT AACNGTCAGC AATGAATATT 
    AGCCTGTTTT CGGACTTTCG ATTCCGATGC AACACGTTAA AAGTAACGTC 
    AGCGAAGATA AATTTGGTAA ATTCATCTGA AACTCCAATG CTGATGGAAC 
    TTAGCTGGTG TGTTGCGTGT TCATAATTTA TGTTATTAGT AACGTCTTAG 
    AAGTTGGAAT ATTCACTCCA AGTTCGCACT TCAAAACTTT CAACAAGTTT 
    TTAGTTCTTA TCGTACGTCT CAAAACAGAG TTGAGGAGAT TTAGCTTCTA 
    CTGTTTAGTG TTCTACACTT GCTTCGTACA AAGAATTGAA TTTTTATTTC 
    CATAGTTACA TGCACATATT TGTATTAACA ATCTCTTATT ATTGGTTAGT 
    ATCATATCTG TAGTTATTCG AACACTGGGG GCAAATTTCA TTTAATCAAT 
    CACCTAACGA GGCTATGATG CATGATTAAC GAACGTTAAA GCCAAAATGT 
    CAAGACTACC CCCTTATTAT CAGCTCGCAG TTGGTCAATG CCTCAATGGT 
    CTGAAGTTCA NACTCTGAAC TATAATACAA GGNCAACTCA ACCCGCTGGT 
    AGTACNAAAG GNCNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24050871 [Map]; Strand: w
      • AT5G59690.1 - [+] show detail - Histone superfamily protein
        Distance: -681; Region: promoter
    Flanking Genome Sequence: 11-3870-1 - 3-prime edge 
    ANNNNNNNNN NNCGCGCNTA TTANNTTNTT TTNTTTNTTN ACNCATGCAA 
    ACGGTAGNAG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCATTACA 
    ATTGNGTCAC TTGCANCNCA NACTATCTTG CTCTGGGAAT CATCTCAGCA 
    TNAAAGATCA TGCTNACTTC AGGGGAACTT AGTGTATNCA TGCCTCGACT 
    GATATTTCTN CTCGANTTTN CAGACACANA NACACTCTNT TANNTCAATA 
    ACAACATGAG ACATGGTGNG GTCATNTNGC TGAGGTAGGA NCACCACCCC 
    CGNCCNCCGA TCNCCCNTNC CCGTNTNGTT GCGAGNCNCG NGGTTTCNNN 
    GCNCCCCNGC GCGNTTNTNC NTTTCNANTT CNCNNCCGNT ANNTCANNNN 
    ANNCCNNAGN GNNNTTATGN CNNNNNNNNN CANGNNNANN GANNGTNAAT 
    NGAANNAGAA NCTNNCNNAG NNNGTAATAT ANNAGAAANN CTCNNGNCNN 
    ANNTNANNCT TTTNCNANTG NNCCCNACNG GNTTCATCAA NTNTNNNANN 
    NNCNNNTNAT NNANNGNNNN NNANANANTN TCCNNCTNCT CGNGCNCNCN 
    GCCGNCGNTN ANNANNNCGN NAANNTCCAC NGNATTTNNT ANNNNGCNTT 
    NGNGGNNNNC NANNNNGGGT TNNCNGGGTT GCNNAANGNG AGNNNNGNNN 
    GGANATNNNA NNNCGGNNGN NATNTGTNNC AAGNCNNNCN ACNGNNGNNA 
    ANNTATNNAN NTCNNCGCNA ACNNATAAAA CNNANNNATA TTTGTTTCCN 
    GNGNNTANNN ANNNGNATNG CGNTTNAGCN NCNNTANGNN TTNTATNCCN 
    NGGNCNCNAG NCNCCCGGTN NCCCCCNTTN CNTCNCANGC CACNNCNGCN 
    TCNACCGGCN NCNTTTATTN CGTTCNCGCC CGCCNAC

AT5G59690.1

Model type
Protein coding
Short Description
Histone superfamily protein
Computational Description
Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: thylakoid; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66790.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR