1. Home
  2. Mutant Lines
  3. 11-3475-1

11-3475-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1571959 [Map]; Strand: c
      • AT4G03540.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 476; Region: intergenic
      • AT4G03550.1 - [+] show detail - glucan synthase-like 5
        Distance: -1389; Region: intergenic
    Flanking Genome Sequence: 11-3475-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG AAATGCTCTT CTGGGACTAA TTTATTACAG 
    TATACATATG TTTAAATAAT AGGCATGTGG GATTATAATC TAAATTCTAA 
    ATGTGGAATC TTCCTTTTGT TCTGACACAA CAAATGGTCG CATGTGCNTT 
    CACCAAGCAT TAGAAAAATA CACACGATTT GGAGCAACTT TAACGTTAAT 
    TTGCTGATGG TCGGTTTTGT TACTACAAAT GTCCATTTAA GACAGGCCGG 
    TTTGCGATAC TCAAATAATT TGATACACAC AAAACACTAT GTCCCACATT 
    AATATTACCT TCATTCGTCT CTTTACGTGT TATGGTCATG AACTTTTAGA 
    AAACGTTCTT TTCAGTGGAA ATTATACAAG CACAACACAC AACACGAGCT 
    ACGTCTCAAA TCGACATCGA GCAAAGTTTA TGTTTATGTG TTTATCTATC 
    TATGTATGAG AGACATAAAA TTAGATCGAT ACTCGAAAAA AGAAAAAGTT 
    AGATTCAAGA TTTCTGAAGG AGAAAAGGGT CGACGACGGC GTGGAGAGAA 
    TATAAGAGTA AGAGTACATA GAGGACGAGT GCAACGAAAC CGGCAATTAA 
    AGCTCCAGTG ATCTGATCGC AAAACTTTGG AACTTGCCCG CAAATAGGAA 
    GCCAACCTGC GTTTGNGTTT CCCTTCTTTC CCACTTGTGC CACCGNTNGA 
    GCTGCCNATA GCTACCANCC GGGCCGNNNC CANCGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1571966 [Map]; Strand: c
      • AT4G03540.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 483; Region: intergenic
      • AT4G03550.1 - [+] show detail - glucan synthase-like 5
        Distance: -1382; Region: intergenic
    Flanking Genome Sequence: 11-3475-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    CATACTGTAT AATTAATCAA ATTTAAAAAA CATTTGTGTT GAAGAGAAGA 
    TGACTAGATT CACTTGATTT TTTAATACTG CTTGGTCATT TGACCAGTCA 
    GGATC

AT4G03540.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G03700.1); Has 607 Blast hits to 607 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03550.1

Model type
Protein coding
Short Description
glucan synthase-like 5
Curator Summary
Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.
Computational Description
glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR