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11-3414-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 99378 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2723; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1271; Region: intergenic
    Flanking Genome Sequence: 11-3414-1 - 5-prime edge
    GTAAGGATTC CTCGCTTCGC TTCTTGTCTC CCTTGTGACG CATATCTAAT 
    ATAAACATAA ATTCATTATG TATCATGTAT GTATGATCTT AGTTCTATAT
    TGACGCAAGA AAATTCAAGT ATTTGTTCAC TTCGTGCTAC CTATGAATGA
    ACATAATTTA AAAAAAAAAA ANNTTNGTTN CTANCNANNA TNTAAAANAG
    TTTNAAGTTN TTCAAAAANC NTANTTAAAA NAAAAATNGA NGGGGTAGGG
    GNGGGGTTNA NNCNTCNATN TACCCANCCA GGGACANCCN CCTNNACTNT
    TTTNGACCNA ATTNTTNNNC CNCNCNTTCC NNTTTACNTN ANAAAATNNN
    AANCCNNTTN CCATNTTTNG TNANANANNT NGCAAACAAN NGTNTTNNTT
    NNGGGGNGGG NACNCNNATT NNAAGGNAAN CCGGGNAAAA ANANCNNGCN
    AGGGNNTNAT CNACCCNNGN GGTTTNTNNN AAAAANCNTT TTTTTTAAAA
    TAANCAAANC CCACCTAATT TTTTTGGCNT NAAAAATTTA AAATTTTTNA
    AAAGGNGGGA TNGTTTCNNC AAAAATNTTT TTTTTTTGGT TTGANCANGA
    NNGAGTAAAG GGNACCNCAT TTGGGGGGGG GGGGNAAATT TGGATTTAAA
    GTTTTTTTNG GTGGGNGGGA AAGGGNNTAA ACNAANNTAT NGTNNTANCT
    TNGAANCCAC CNGAANNGCG N

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR