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11-3409-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185260 [Map]; Strand: w
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -746; Region: promoter
    Flanking Genome Sequence: 11-3409-1 - 3-prime edge 
    GGTATGATCG CATCCGTTAG TATATGCAAT GCAATCGTAT ATATTCTTTT 
    TTGAAGACTT GATGAACCAT TCGCCGTGGG TCCCACCCGC TATGTAGGGA 
    TACCCCATCT AGTCTTAACG AGCTTTGATG CATGAAAAAA TTCGAAAACA 
    ATGCNTTGAA CAAGTAATTT TGGGTCCGTA ATATAGCCCA AATCACGAAA 
    ATGCCCGAAA AAGTACTTAA AGGTCAAAAT TTGGGGTCGA CAAAAAGTCA 
    ATGGAAAAGT TCCATTGTCC TGCTTATTTC GTCGGAGGGC TATCTTTGGG 
    CTTTCCGAAA AGGTATCACA TGCTGAGTTT GGCCTCACGG TCTAAAAGTT 
    ATGGAGTCAT AAAGTTTTAA CCAAAAAAAA AANGGTTAAN TTTAAAANAG 
    GGNTNCNNCC CNNGGNNTTC CCGGGNGGNC NCCCNTCNTA NTNNTANTTT 
    CCCCNAACCN CCNTNAANNG GGGANTTNTN ANGGNATNAC NANCCNGGNC 
    CGTNAACCAC CNTGNCCNTT TAAA

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR