1. Home
  2. Mutant Lines
  3. 11-3283-1

11-3283-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1502369 [Map]; Strand: c
      • AT1G05180.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -545; Region: promoter
      • AT1G05180.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -545; Region: promoter
      • AT1G05180.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -545; Region: promoter
      • AT1G05190.1 - [+] show detail - Ribosomal protein L6 family
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-3283-1 - 3-prime edge 
    GAAATTGTGC CCAAGTTCTT GTTCAATCAA AGCACTAAAG AAATTTTTGT 
    CAGAGCATCA AAAACAATTA ATGGGTTCCT TTAAAAACTT ACTCAAGAAT 
    CCCAACACAA ACATCTTCAT TTCTAAACAA ATTTGAGCAA ATACACATAA 
    ACATTGAAAG GAAGAGATAA GTAAGTAGAT AATAATGAAA AATGAAGATC 
    ATTTCTTCTT TCCAGCTTTT CCTTCCTTCC TCCGAACTAT CTCATCGGAA 
    TACTTGACTC CTTTCCCCTT GTATGGCTCT GGTGGCCTCC ACTTCCTAAC 
    CGTTGCAGCA AACTGCCCGA TTTCGCTCTT GTCGTATCCA CTCACAGTGA 
    TTCTTGTGTT CTCTTCCACT TTCACTTTCA GACTATCCGG TATCTGCATC 
    TTCACCGGGT GTGAAAACCC GAGATTTAGC ACCAGCTCCT TTCCGTCTAC 
    TGTTGCACGA TAACCAACAC CCACAAGTAT AAGCT

AT1G05180.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.
Computational Description
AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 6539 Blast hits to 5902 proteins in 1375 species: Archae - 158; Bacteria - 2625; Metazoa - 1326; Fungi - 867; Plants - 442; Viruses - 0; Other Eukaryotes - 1121 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05180.2

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.
Computational Description
AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05180.3

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary
Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.
Computational Description
AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05190.1

Model type
Protein coding
Short Description
Ribosomal protein L6 family
Computational Description
embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink).
Link
InterPro Scan - TAIR