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Mutant Lines
11-3110-1

11-3110-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 125140 [Map]; Strand: w
- AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: 0; Region: intron8 (CDS)
- AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: 0; Region: intron8 (CDS)

AGNNANGNGA CGNGNCNNAC GNANAGGCTN CCACTNCNGG CGCGGGANCA 
CNAGGCCCGG GCNNNGGACC AAGCTGNGNC ANATAGAGAG NNGTAGTTAC 
NCNGAGAGAN AATGGNCTNT NTAGAAANAA GAAATCAGNA TAACGTGCNN 
GTNTTCTGTG GAAAATAAAA TAGAAANAAT CTCACAAGCA GATTTGTTGA 
TGCAGNGTTT GTGGGGGCGG CTACCCATGT TTTGAAATAT CCGCAATAAA 
TGCCGACAAA CCACCGCTTA CAATTGCACA GATTAAAGAT CGNGTCAAGC 
AATTGGAAGT AGNTGGTAGG CCGGATCTTT ATTTTTCACT ATNTATTTAT 
CTTTNCAATC TTGTGCACCA CTTTTTNGGT ATCTCTANGA TCCAATNGTT 
NCCAANTAGA GAAAGACCAA TCAGNTGTAT GATCCAGAGN CGAGCNANAA 
TNGGNNCNAA TGCATNNATN TNGNNTATAN GCTNGAGCNA TGANNNGNTA 
NGGGGNNAGN ATCCGGNTGG CAGGAAAGAC GATAANAGNN NCAAATNAGC 
CATACNTNAA CAAGAAAGCT GAACTNTNNC NANGAAGCAA GNNGGGNAAN 
GGGCGCTGAC ACTGNAGAGA GGCNGGGNAA GGNATGGAAA AANTGAACCG 
NACCTGAACG GGNGNANNNN NNGNGNNNNG ANANNANNGA ANAAAANNNA 
GGGGGGGGGG GGGNNGGGNG GGGGANNGAA GAANGNNGGG GNGGGNANAA 
A

3 prime edge [+] show sequence

Chromosome: 2; Position: 108767 [Map]; Strand: w
- AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon1 (5UTR)
- AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: -156; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGGTCTCTGT TTTCTTCTTA TTCTTCTATC AAACCGTCAA GTTGGGAAAC 
AAAACAAAAC TCGCAAGTTT AACAACGCGT CTTCTACCTC CTCCTCATCG 
GACTATTTAT CTATAGTCTT CGTTAGATCA ATTCCTCTGT TTTACTCCTA 
AGTTTCGAGA TCCACATTTC TTTTTAACCT CATCTCATCT CTTAGTCGAG 
ATCTTCACTT TCTGATGACA ATAGGGTCGT TTTTCTCTTC TCTCTTATTC 
TGGCGCAATT CTCAGGTAAC CTCAATCGAC TATTCTCTGT TCTACTCCTT 
TTTTCTTTAT CATTTTAAAA ATCCTAACAT TGAAAATAAA GTAGTTAAAT 
AGAGTCAACG AAAACATTGT TAATGAAACA GTGGTGTGCT TAGCATAACG 
AATCAGACAG ACAAAAAGTG TCTGGATC

AT2G01180.1

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01180.2

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01220.1

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01220.2

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link: InterPro Scan - TAIR