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11-2866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 219388 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2866-1 - 5-prime edge 
    ANAGCGATGA CCTTACCGNC NGTGGNCTCT CTTACTTCTG ACTTATTCNG 
    ANGCNGAGGA NGAANTCGGG AGATGTCNAN CNTANNNGNA ANNGGATGTN 
    CNCCACCGCT TGCCAAACCT CCNACCCATG ACGTAATGAG CACTCGATTG 
    TCCGTGTCTC CCAGTCGCTG CTGTGAATCC GACGAACATT TCGTCTACGA 
    CAATATCTGA CAGTTTTGGA ACCTCTCGTG AGATCAAGGG GATTCTTGGT 
    TTATATCCCA ATCTGGTTGG GTAAACAGTG AGGTTAAGCG TTTTGGTTGG 
    TCCGTGATAA TCCAAGAAGA CTTGGATTGG CTCGCCGCTC ACCAGTTGGA 
    ATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 219275 [Map]; Strand: w
      • AT5G01560.1 - [+] show detail - lectin receptor kinase a4.3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2866-1 - 3-prime edge 
    ATCGCTCTTA TCGTGGCTTT ATCGACTGTT ATATCGATCA TGTTGGTGTT 
    GCTGTTCCTC TTCATGATGT ACAAAAAACG AATGCAGCAA GAAGAGATTC 
    TAGAAGATTG GGAAATCGAT CATCCTCACA GATTTCGATA CAGAGACCTC 
    TACAAGGCTA CTGAGGGATT CAAGGAGAAT AGGGTTGTCG GAACCGGAGG 
    ATTCGGAATT GTTTACAGAG GAAACATCAG ATCATCGTCT GATCAAATCG 
    CAGTGAAGAA GATAACCCCA AATAGCATGC AAGGTGTTCG AGAATTTGTC 
    GCGGAGATTG AGAGTTTGGG GAGATTAAGG CATAAGAATC TGGTGAACCT 
    CCAAGGATGG TGTAAACACA GAAACGATCT CTTGTTGATC TACGATTATA 
    TTCCCAACGG AAGCT

AT5G01560.1

Model type
Protein coding
Short Description
lectin receptor kinase a4.3
Curator Summary
Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.
Computational Description
lectin receptor kinase a4.3 (LECRKA4.3); FUNCTIONS IN: kinase activity; INVOLVED IN: abscisic acid mediated signaling pathway, seed germination; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 124782 Blast hits to 123109 proteins in 4852 species: Archae - 131; Bacteria - 14218; Metazoa - 45637; Fungi - 10709; Plants - 35284; Viruses - 441; Other Eukaryotes - 18362 (source: NCBI BLink).
Link
InterPro Scan - TAIR