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11-2756-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18024560 [Map]; Strand: c
      • AT4G38545.2 - [+] show detail - other RNA
        Distance: 0; Region: exon3 (NonCoding)
      • AT4G38545.1 - [+] show detail - other RNA
        Distance: 0; Region: exon3 (NonCoding)
      • AT4G38540.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-2756-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    GGTGAAGCGA TAAAGGCAAA GAGTCTTTTG AAACAGAAGA AAATGAAGAA 
    GAGGGTTATA AGAGGATTGA AGAAGGTTTG AAGAAGTATG CAGGAGAAAG 
    GAAATGGAGA AGCATTGATC TTATAACAAC GGCATATACA GTAGGATTCA 
    TACAGCAGAG CAGAGGGAAG TGGATGAACA TGTTCAGAGA CAGGTTCCTG 
    TCGTCTTACC TTTCTAGGAT GCTGCTGAAA AAGTCCCATT TCGATTGCGG 
    AAGCCTTGTC CCATGATGAT TCTCAAACAT AAGTCAAAAG CT

AT4G38540.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38545.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR

AT4G38545.2

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR