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11-2638-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 80667 [Map]; Strand: w
      • AT2G01090.1 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01090.2 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01100.2 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -769; Region: promoter
      • AT2G01100.1 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -770; Region: promoter
      • AT2G01100.3 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -773; Region: promoter
    Flanking Genome Sequence: 11-2638-1 - 5-prime edge 
    ATAATTACAG GGCAGAAGAA GATGTTGTTG ATCAGAAAAT ATACTTTGAG 
    GAATCTTGCA AACCAAAATG TGTGAAGCCA CTACTTGAAT ATCAGGTGAA 
    TACGACTTGA GCNTGTCACN TGGTCATAAT CTTGTTTTGC ATTATACGAG 
    TCATTTGACA TAGAGAGAGA GTTGATTGCT TTCGGTGCTG CTTATCTATC 
    TCACATCACA TGGCTTCTTA GTGTGGCTTA GTTTTAACAT CTTGTTGTTG 
    TGGGTGGTTC AGGCGTGTGT CAAGAGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 80551 [Map]; Strand: w
      • AT2G01090.1 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: intron2 (CDS)
      • AT2G01090.2 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: intron2 (CDS)
      • AT2G01100.2 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -885; Region: promoter
      • AT2G01100.1 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -886; Region: promoter
      • AT2G01100.3 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -889; Region: promoter
    Flanking Genome Sequence: 11-2638-1 - 3-prime edge 
    GTAATTATAA CCATCGAGTA GGATGGAAAA TCAAAGGTTA GATAAGCAAA 
    CTAAGGTAAC GAATAAAACG TTCATAACTA TGACATAGCA ATTTTGTTGT 
    CAAAGTAGTA GGCTGTTTAA GGGATGAAGC TAAGCT

AT2G01090.1

Model type
Protein coding
Short Description
Ubiquinol-cytochrome C reductase hinge protein
Computational Description
Ubiquinol-cytochrome C reductase hinge protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase hinge (InterPro:IPR003422); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase hinge protein (TAIR:AT1G15120.2); Has 146 Blast hits to 146 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01090.2

Model type
Protein coding
Short Description
Ubiquinol-cytochrome C reductase hinge protein
Computational Description
Ubiquinol-cytochrome C reductase hinge protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase hinge (InterPro:IPR003422); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase hinge protein (TAIR:AT1G15120.2).
Link
InterPro Scan - TAIR

AT2G01100.1

Model type
Protein coding
Computational Description
unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01100.2

Model type
Protein coding
Computational Description
unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01100.3

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR