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11-2281-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176129 [Map]; Strand: c
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2281-1 - 5-prime edge 
    CAAGAGACCA GCATTTTATA GTCGGTTCTC TCCACAGCCG CACTATTCAT 
    TCCGTCTCCG ACGCTGGAGT CATCGAAACC CTAATTTCAG ATCTCGATCT 
    ACCGGAGAAC TCCACTATCC TCGGTCTCGC CGTTGACTCT ACTAATCGCC 
    GTCTCCTTGC CTGTATCCAG AGTTTGCCGC CTCTCCCTCC CTTCAGTGCC 
    CTAGCCTCCT ACGATCTCCG CAGCGGAGGC CGTCGTGTAT TCCTCTCTCC 
    TCTCCCGTCT CTTCCCGGAG ACGACGAAGA CATCGCTCGT GATGTCGCCA 
    ATGACGTGGC GGTTGATTTC AAAGGAAACG CTTACGTCAC CAACTCAGCC 
    AAAAACTTCA TCTGGAAAGT CGATCGCGAC GGCGCANCTT NATCTTCTCC 
    AAATCGCCGN NGTTCAATTC GCANCCTGTG GCGGNNGACN CNGACNCANG 
    TTTNCGNGAN NGCNGCNNGA ACGGGGATNG NGTNNNNNGN NNNAGGAGGN 
    TNNNNGGGGG NNGANAGNNN NNNNNGGNGG GNG

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR