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11-2127-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2852750 [Map]; Strand: w
      • AT1G08900.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G08900.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G08900.3 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2127-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAGTT 
    CCATGATTTT GGACTGAGCA GGCGACGAAT ATGACATCTA CAAAGTATGT 
    TATAGTTATG AAAATTATGC ACGAAGAAAT TAGGATTCTA AAACTGTAAT 
    ATCCAAAATC AGTGGATAGC AAATTGAGAG AGAAAGGAAG AGATCTCACN 
    GGCGCAGCCA TAACAGAAGG ATC

AT1G08900.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08900.2

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08900.3

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 22743 Blast hits to 22256 proteins in 1748 species: Archae - 444; Bacteria - 7522; Metazoa - 5012; Fungi - 6093; Plants - 2466; Viruses - 0; Other Eukaryotes - 1206 (source: NCBI BLink).
Link
InterPro Scan - TAIR