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11-2123-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26259996 [Map]; Strand: c
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-2123-1 - 3-prime edge 
    NNGGNGGGGA GNNGAGNNNN NGANAAGGNG NNNANNANNN NNNTNTTNNN 
    NNNNNTTTNC GGNTACNTNC NGGTNCGTTT TNGNTACCGG NCTATCCNGT 
    TTTCACATTG NACAGTAACT CTGNTTATGN NTAAAATTTT GTCTTTAATT 
    ACGCAGATNA TGGGATTAAA AAACAGAGAA CAAACAGAAT CAATAAATCT 
    AAACAAAGAA ACTGAAGGAT CTTGCNGTNG CAGAAGTGAT AACAGNNCAG 
    ATAATCTCAN ACTAGATATN TCAACTGCGC CGCCATCAAA CGACAGNACA 
    TTAACCGGGG GCCACCCNCC NCCACCACAN ACAGTNGGGG GAACNANCCN 
    NGGGNNCGCC GACCACCCCT NCCCCNAAAG TANNAATTTN NTACTACCCC 
    ACCCCCCNCN NCCCNNAAGA AAGNNTNAAT NNCNCNGACC ANNGCGCGNN 
    CAAAAANTAN NGANGNGAAN AANCNAGANN GNGNAGNGGT NNGNNNGNNA 
    AGNGANGGGG NAGAGGGNNA NTGNGGGCGN GTGANGNGCT NNANGCANCC 
    GAATCGGGNG NGCNNGGNAN GCNNNGTNNN NATGCNNAAN GCCATAACGA 
    NGACANNGNC ANAAANCNAA ACNNACGCAN AANANANCCC NGAACAAACG 
    ACCTNNGNNC NANACCNCNC CAANCNNGGG CNAAAGTTAN NNNANGNNNN 
    CGNNNNNNTN NNACCNNACN CANANNGTNA NNCNNACANN NTNNACAACG 
    AACNNNGNGC GAANANNANN CNCGTCNGCN AANANNACNA AACGNNCGAT 
    NGGNTNTCNG NGATCNNANC CGCACNAAGT CNCCGCCGNG TGCNCCTCCG 
    ACNCACGGGC ANCNGGGNTN TNGTGGAGNT ATACNCNCCN GGCTNCNNCC 
    GNNCNNCTNT

AT1G69780.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper protein family
Curator Summary
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description
ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR